Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_3530 |
Symbol | |
ID | 8327720 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 4099768 |
End bp | 4100571 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644944028 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003101268 |
Protein GI | 256377608 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0209016 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGTTTTGT ACGCTGGACA GGGTGATGCT CGGCGGTCCC TGTCGCTGCT GTGGCGGGAG GACACCGGTG ACCAGGTGAA ACCGGGGCCG AAGCAGGGGC TGACGGTCGA CTCGATCGTG GACGCCGGGA TCGCGGTGGC CGACGACGGC GGCATGGAGG CGCTGTCCAT GCGGGCGGTG GGCGAGCGGC TCGGGCGCAC GGCGATGGCG CTCTACACGT ACGTGCCCAA CAAGGCCGAG CTGGTGGACC TGATGTACGA CCGGGTGCTG GCGGAGCTGC CAGGGCGGTA CGACCTGGAC GACGGGTGGC GGCCCGCGCT GGGGGAGTGG GCGTGCGACA CCAGGGCGTT CTACCTGTGG CACCCGTGGG TGCTGCGCGT CTCGCAGGCG CGGCCGGTGC TCGGGCCGAA CGAGTTCGCG TCGCTGGAGA CGCTGGTGAC GATCCTGCGG GAGACCGGGA TCGGGCGGGG CGGGCTGCGC GGGATCGTGG GGGCGCTGAC CCAGTTCGTG CGCGGGTCGG CGCAGGTCAC CGCGGACACG CGGGGGGCGG CGAAGGCGAC CGGGATCGGC GACGAGGAGT GGTGGTACGG GCGGGCGCCG CTGCTGGACG TGTACGACCT GAGCAACCGG TTCCCGATGG TGGTGTGGGT GAACGAGGAC CCGCCGCCGC CGGTCGAGCT CTCCGGCGAC GGGCCGCCGG AGGGGGACGG GTACCTGGAG CGGGAGGCGT CGCTGAGCTT CGCGGCGGGG TTGGAGGTGC TGCTGGACGG GATCGAGGTC GCGTCGGCGC GGGCGCGGGG GTGA
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Protein sequence | MVLYAGQGDA RRSLSLLWRE DTGDQVKPGP KQGLTVDSIV DAGIAVADDG GMEALSMRAV GERLGRTAMA LYTYVPNKAE LVDLMYDRVL AELPGRYDLD DGWRPALGEW ACDTRAFYLW HPWVLRVSQA RPVLGPNEFA SLETLVTILR ETGIGRGGLR GIVGALTQFV RGSAQVTADT RGAAKATGIG DEEWWYGRAP LLDVYDLSNR FPMVVWVNED PPPPVELSGD GPPEGDGYLE REASLSFAAG LEVLLDGIEV ASARARG
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