Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_3485 |
Symbol | |
ID | 8327675 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 4050544 |
End bp | 4051353 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644943985 |
Product | hypothetical protein |
Protein accession | YP_003101225 |
Protein GI | 256377565 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3509] Poly(3-hydroxybutyrate) depolymerase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCCGTCA CCCGCGCCTC GGTCGAAGCA GCAGGCCGCA CCCGCACCTA CACCCTCGTC ACGCGCACCG ACGAGATCAC CGACCTGGTG CTGGTCTTCC ACGGCTCCAA GCAGACCGCC GACAAGCACC GCGCCTTCAC CGGCCGCGCC TTCGACGCGC TCGCCACCGC CGACACCGCC GTCGCCTACC TCGACGGCCA CAAGGGCAAC TGGAACGACG CCCGTCGCGG CAGCCGCTTC CCCGCCCGCG TGGAGAACGT CGACGACGTC GCGTTCACCG AGGCCGTCAT CGCCCGTCAC GCTCCCGACC GGGTTCACGC GATCGGGTAC TCCAACGGCG GCCAGTTCGT GTTCCGCCTG CTGCACGAGC GCCCCGGTCT GCTCGCGGCG GCGGTCGCCA TCGGCGCGAC CATGCCGACC CCGGACGGCT TCACCGTCCC CACCGCCCCC GCGCCCACCC CGTTGCTGCT GGTCAACGGC ACGCGCGACC GGATCGTCCG GTACGAGGGC GGCGAGGTGA AGCCGTGGGC GCGGGCGCTG TTCAAGGTCG ACGGCGACAA CCTCTCCGCC CCCGCCACCG CCGCCTACTT CGCGCGGCAC AACGGCATCA CCACCGCGCC GACCAGCACG ACCACCGGCA AGGCCGAGCG CACCGCGCAC GCCCAGGACG GCAGGCCCCC GGTCACCCTC CTCACCGCGC ACGGCGCAGG CCACACCATC CCCGGCCCGA AGAAGGCCCC GTTCGTGCTC GGCTCGACCA ACCGGGACGT GAGCACCGCC GACCTGGCCC GCGAGCTGTT CGCCCGCTAA
|
Protein sequence | MPVTRASVEA AGRTRTYTLV TRTDEITDLV LVFHGSKQTA DKHRAFTGRA FDALATADTA VAYLDGHKGN WNDARRGSRF PARVENVDDV AFTEAVIARH APDRVHAIGY SNGGQFVFRL LHERPGLLAA AVAIGATMPT PDGFTVPTAP APTPLLLVNG TRDRIVRYEG GEVKPWARAL FKVDGDNLSA PATAAYFARH NGITTAPTST TTGKAERTAH AQDGRPPVTL LTAHGAGHTI PGPKKAPFVL GSTNRDVSTA DLARELFAR
|
| |