Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_3443 |
Symbol | |
ID | 8327633 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 4007579 |
End bp | 4009156 |
Gene Length | 1578 bp |
Protein Length | 525 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644943946 |
Product | NUDIX hydrolase |
Protein accession | YP_003101186 |
Protein GI | 256377526 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000281945 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGCCGAAAC CTGCCGACAA CTCCGCGCGA GAACGCCGCG CACTCCTCAC CACCGCAGCA CTCGGCTTCC TCACCCTCGG AGCCCTCGCC AGCGCCACCG GCCCCACCCT GCCCACCCTC GGCGCCCGAC TCCACCTCAC CCCCACCCAC ACCGCCTGGC TCCTGGCCAC CTTCGCCGCA GGCGCCGTCC TCGGAGCCGC CACCACCGGC GCACTCCGCC ACACCCCACC CGGCCCCCAG CTCACCGCCG CCGCCGCACT CGCCACCACC GGCAGCGCCG CACTACCCCT CGCCCCGAAC CTCCCGACCA CCCTCACCTG CCTGCTCCTC ATCGGAACCG GCTTCGGCGC CGCCAACCTC GTCCTCAACC TCACCCTCGC CCGCCGGCAC GGGGGAGGAG CCACCCTCAC CGCGGTCAGC GCCACCTTCG GCCTCGGCGC CACCGCCACA CCCCTCATCG CCGCCACCAC CCCCACCGAC CCACGCCCAG CCCACTGGAC CTGCGCCGCC CTCGCCCTCA CCCTGCTCGC CGCCACCACC CGACTGCGCA CCCCGGCAGC CCCGGCAGCC CTGACCGCAC CACAAACCCC AGCAACCCCA CCACCAGCGA GAACACCCAC GGCAGCCCCC ACCACCGCGC TCCTCGCCAC CACCCTGCTC GGCTACGTCG CCCTCGAAGG CGCCACCACC GGCTGGGCCA CTACCCACCT CACCGCCACC ACAACCCTCA CCACCACCTG GACCACCGCG GCCCCGGCCC TCATCTGGCT AGCCCTCACC GCAGGCCGCC TCGCCACCGC ACCCCTGCTC CGCCACACCC ACCCCGCCAC CATCACCCTC ACCGCGCTCA CCGCAGCCGC AGCCACCACC ACGCTCACCC TCAACCCCAC CACCGCGGCA GCCGGCTACG CCCTCACCGG ACTCGCCATC GCCCCCGTCT TCCCCGCCGT CATCGCCTGG CACACCACCA CGAACCCCGA CGACCGGGGC ACCACCCACG TCATCACCGC GGCACTCGCA GGCCCGCTCG TCACCGCACC CGCCACCGGC CACCTGATCA CCACCACCGG CCCCCACGCC ATCCCGTGGA CCCTCACCGC ACTCGCCCTG CTCACCGCCA CCACCGCGGC ACTGACCCGT CGACGCCGAG CACCCCGACC CGAACCCGAA GGCGTCCAGA TCATCCTCGT CAACACCCGC GACGAGGTCC TGCTCCAACT CCGCGACGAC AAACCGGGAA TCCCGCACCC CAACACCTGG TGCATCCCCG GCGGCCACCT GGACCCCGGC GAAACCCCAC GCCAAGCCGC CACCCGCGAG CTGAACGAGG AGATGGGCCT CACCATCCCC GCCCACCACC TGCACCACAT CACCTCGACC CGCCGCGCCT ACGGGTACGA GCACACCTAC TGGACCCGCC TCGACGTCGA CCCCACCACC ATCGACCTCA CCGAAGGCCA ACGCGTCCAG CACTTCACCG CCGCCCAGAC CGCCACCATG GCACTGGGCT ACGAGGACAA CACCGTCCTC GCCGCCTTCC ACGCCCACCT CAGTACGGAG CCCGAGACCG CTCCTTGA
|
Protein sequence | MPKPADNSAR ERRALLTTAA LGFLTLGALA SATGPTLPTL GARLHLTPTH TAWLLATFAA GAVLGAATTG ALRHTPPGPQ LTAAAALATT GSAALPLAPN LPTTLTCLLL IGTGFGAANL VLNLTLARRH GGGATLTAVS ATFGLGATAT PLIAATTPTD PRPAHWTCAA LALTLLAATT RLRTPAAPAA LTAPQTPATP PPARTPTAAP TTALLATTLL GYVALEGATT GWATTHLTAT TTLTTTWTTA APALIWLALT AGRLATAPLL RHTHPATITL TALTAAAATT TLTLNPTTAA AGYALTGLAI APVFPAVIAW HTTTNPDDRG TTHVITAALA GPLVTAPATG HLITTTGPHA IPWTLTALAL LTATTAALTR RRRAPRPEPE GVQIILVNTR DEVLLQLRDD KPGIPHPNTW CIPGGHLDPG ETPRQAATRE LNEEMGLTIP AHHLHHITST RRAYGYEHTY WTRLDVDPTT IDLTEGQRVQ HFTAAQTATM ALGYEDNTVL AAFHAHLSTE PETAP
|
| |