Gene Amir_3443 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_3443 
Symbol 
ID8327633 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp4007579 
End bp4009156 
Gene Length1578 bp 
Protein Length525 aa 
Translation table11 
GC content73% 
IMG OID644943946 
ProductNUDIX hydrolase 
Protein accessionYP_003101186 
Protein GI256377526 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000281945 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCGAAAC CTGCCGACAA CTCCGCGCGA GAACGCCGCG CACTCCTCAC CACCGCAGCA 
CTCGGCTTCC TCACCCTCGG AGCCCTCGCC AGCGCCACCG GCCCCACCCT GCCCACCCTC
GGCGCCCGAC TCCACCTCAC CCCCACCCAC ACCGCCTGGC TCCTGGCCAC CTTCGCCGCA
GGCGCCGTCC TCGGAGCCGC CACCACCGGC GCACTCCGCC ACACCCCACC CGGCCCCCAG
CTCACCGCCG CCGCCGCACT CGCCACCACC GGCAGCGCCG CACTACCCCT CGCCCCGAAC
CTCCCGACCA CCCTCACCTG CCTGCTCCTC ATCGGAACCG GCTTCGGCGC CGCCAACCTC
GTCCTCAACC TCACCCTCGC CCGCCGGCAC GGGGGAGGAG CCACCCTCAC CGCGGTCAGC
GCCACCTTCG GCCTCGGCGC CACCGCCACA CCCCTCATCG CCGCCACCAC CCCCACCGAC
CCACGCCCAG CCCACTGGAC CTGCGCCGCC CTCGCCCTCA CCCTGCTCGC CGCCACCACC
CGACTGCGCA CCCCGGCAGC CCCGGCAGCC CTGACCGCAC CACAAACCCC AGCAACCCCA
CCACCAGCGA GAACACCCAC GGCAGCCCCC ACCACCGCGC TCCTCGCCAC CACCCTGCTC
GGCTACGTCG CCCTCGAAGG CGCCACCACC GGCTGGGCCA CTACCCACCT CACCGCCACC
ACAACCCTCA CCACCACCTG GACCACCGCG GCCCCGGCCC TCATCTGGCT AGCCCTCACC
GCAGGCCGCC TCGCCACCGC ACCCCTGCTC CGCCACACCC ACCCCGCCAC CATCACCCTC
ACCGCGCTCA CCGCAGCCGC AGCCACCACC ACGCTCACCC TCAACCCCAC CACCGCGGCA
GCCGGCTACG CCCTCACCGG ACTCGCCATC GCCCCCGTCT TCCCCGCCGT CATCGCCTGG
CACACCACCA CGAACCCCGA CGACCGGGGC ACCACCCACG TCATCACCGC GGCACTCGCA
GGCCCGCTCG TCACCGCACC CGCCACCGGC CACCTGATCA CCACCACCGG CCCCCACGCC
ATCCCGTGGA CCCTCACCGC ACTCGCCCTG CTCACCGCCA CCACCGCGGC ACTGACCCGT
CGACGCCGAG CACCCCGACC CGAACCCGAA GGCGTCCAGA TCATCCTCGT CAACACCCGC
GACGAGGTCC TGCTCCAACT CCGCGACGAC AAACCGGGAA TCCCGCACCC CAACACCTGG
TGCATCCCCG GCGGCCACCT GGACCCCGGC GAAACCCCAC GCCAAGCCGC CACCCGCGAG
CTGAACGAGG AGATGGGCCT CACCATCCCC GCCCACCACC TGCACCACAT CACCTCGACC
CGCCGCGCCT ACGGGTACGA GCACACCTAC TGGACCCGCC TCGACGTCGA CCCCACCACC
ATCGACCTCA CCGAAGGCCA ACGCGTCCAG CACTTCACCG CCGCCCAGAC CGCCACCATG
GCACTGGGCT ACGAGGACAA CACCGTCCTC GCCGCCTTCC ACGCCCACCT CAGTACGGAG
CCCGAGACCG CTCCTTGA
 
Protein sequence
MPKPADNSAR ERRALLTTAA LGFLTLGALA SATGPTLPTL GARLHLTPTH TAWLLATFAA 
GAVLGAATTG ALRHTPPGPQ LTAAAALATT GSAALPLAPN LPTTLTCLLL IGTGFGAANL
VLNLTLARRH GGGATLTAVS ATFGLGATAT PLIAATTPTD PRPAHWTCAA LALTLLAATT
RLRTPAAPAA LTAPQTPATP PPARTPTAAP TTALLATTLL GYVALEGATT GWATTHLTAT
TTLTTTWTTA APALIWLALT AGRLATAPLL RHTHPATITL TALTAAAATT TLTLNPTTAA
AGYALTGLAI APVFPAVIAW HTTTNPDDRG TTHVITAALA GPLVTAPATG HLITTTGPHA
IPWTLTALAL LTATTAALTR RRRAPRPEPE GVQIILVNTR DEVLLQLRDD KPGIPHPNTW
CIPGGHLDPG ETPRQAATRE LNEEMGLTIP AHHLHHITST RRAYGYEHTY WTRLDVDPTT
IDLTEGQRVQ HFTAAQTATM ALGYEDNTVL AAFHAHLSTE PETAP