Gene Amir_3360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_3360 
Symbol 
ID8327550 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp3935634 
End bp3936218 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content76% 
IMG OID644943868 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003101108 
Protein GI256377448 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.372466 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGTCA CCGACGAGCG GACCCGCGTC ATCCTGGACG CGGCGATCGG GTTGTTCCTG 
CGCTACGGCT ACCGCAAGAC GGCGATGGAC GACGTCGCCA AGGCCGCCGG GTTGTCCCGG 
CAGGGGCTCT ACCTGCACTA CCGGGCCAAG GACGTGCTGT TCGCCGCCGT GCTGGAGCGC 
ATGGTCGGGC AGGTGCGCGA GGCGGCGCTG GCGGAGCTGG GGCGGGTGGA CGCGCCGCTG 
GAGCGGCGGG TCGCCTCGGC GCTGGAGGCG CTGCACGGCG AGGCCGCGAC GGCGAGCAGC 
GCCAGCGTGG GCGAGCTGCT GCGGGCCGCC GCCGAGGTGG GCGGGCCGCT GCTGGCGCGG 
TTGCACGACG ACGTCGTGGC GGCGCTGGTG GACGTGCTGG AGACCTCCGG GGTGGCCGGG 
GCGTGGCGGC CCGGCGGGGT CGGGGCGGAG GAGCTGGCCG AGCACCTGTA CCTGGTGTCG 
TCGGCGGTCA AGCAGCTCGA CGCGCCCGTG GACGTGCAGC TGGCGCGGCT GCGCGTCGCC 
GTCCGGATCG TGCTGCGCGG CTCCGACGCC GACGGGAGGG CCTGA
 
Protein sequence
MTVTDERTRV ILDAAIGLFL RYGYRKTAMD DVAKAAGLSR QGLYLHYRAK DVLFAAVLER 
MVGQVREAAL AELGRVDAPL ERRVASALEA LHGEAATASS ASVGELLRAA AEVGGPLLAR 
LHDDVVAALV DVLETSGVAG AWRPGGVGAE ELAEHLYLVS SAVKQLDAPV DVQLARLRVA 
VRIVLRGSDA DGRA