Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_3358 |
Symbol | |
ID | 8327548 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 3932954 |
End bp | 3934537 |
Gene Length | 1584 bp |
Protein Length | 527 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 644943866 |
Product | hypothetical protein |
Protein accession | YP_003101106 |
Protein GI | 256377446 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00327264 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCACGCCC GCGAAGAGCC GAGCGCAGCC CGCGCGCGCA CCGCGCCGCA GGCGCGGACC CAGGCCCAGC CCCAGGCGCG GCCCCAGCCC CCGGCGCCGG TCCCGACGCC GGGCGGACCC GCTCCGGAAG GGCTGCTGGC GTTGCAGCGG CAGATCGGCA ACGCGGCCGT GTCGCGGCTG GTGGAGTCCG GGGAACCGGT GGTGCAGCGG AAGGTCGGGT TCGAGTTCGA GGACTCCCAG TGGCGGCCGT GGCGCAGGGT CAGGCGCAAC GAGGGCATCC TCAGCAACGC CCGCAACCAG CTGGGCGGCG TCGACCAGGT CCACCCCGCC GAGCGCAAGG CGGTGCTGCA CCGGGGCCGC GGCTACGAGC TGGAGGCCGA CGACACCCCC GGCCCGAACC ACAGCAACAT CGAGTTCGTC ACCAAGCCCT TCGAGGAGGA CGCGACGGGC GTGGCCGAGC TGCAGGACAC CATCGCGGAC ATGACCACCG TGCTCACCAG GCTGGACGGG TTCGTGGGCA GGCCGGGCCC CGGCCAGGGC GCCCCGCCGT TCCCGCTGGG CAAGGCCGAC AAGGCCAACT ACGTCCGCGA CCCCGAGCAC CGGCTCAGCG GGTCGGGCGG TCTGGCGGCC AGGAACCTGC TGCTCTCCGG TGGCGTGAAG GACGGGGCGT TCAAGATGCA GGCCACCTCC GGGGTCCCGC TGGCGAACCT GCCCGCCGTG ATGGAGCGCC TCGGCAAGGA CGTGCCCGGC GAGACGGCGC GGCAGAGCGC GGACCGCGCC CCCGAGCGCA GGCTCGTCGT GCAGGACCCC GCCGCGCCCA ACGAGCCCAT GGAGGTCCAG GGCAGCGCGC CGACGCTGGC CAGGCGGGTC GTCACGGCGC TCCAGCAGGA CGCGGCGCTC GGCCCGCGCC TGACCGGCGA CACCACCAAG CTGACCGGCT TCCTCGCCTC GGTGCTGCTG ACCCTGAAGC TGCTCAGGCG CCCCGGCGGT CGCACCGCGC CGGTGAAGTA CCGGCTGACC CTGCTGCCGC GCAACAGCTA CGCGCACATG TTCGCCGACC TGCCCGGCGA GCAGGCGAAC GCGCTGCGCG AGCACGCGGG CCTGCTCGTG GACGCCGTGG TGGCGGTGTC GAACGCGCGC CCGATGATCC GCGGCGACTG GGACGCCAAC CTGACGGCGG GCAGCGCCCT GATCGCGCCG ACGCCCGGCC CGCTCGCCAG GCAGGCGGAC GGCCAGGTCG CGCACGACCC GCCCACCCGG AGGAACGAGG CGCTGGCGCG GGTGGGCATC GGGACGTGGC TGGTGGGCGT CACCAACGGC ACCGACCTGC TCACCCCGGC GGTGCTGCAG CGCTGGCTGA ACGGGCAGGT CGACGCCGAC GTGCGGGAGG ACGCGGCGGG GGCGATGGAG AGCTTCGGCA CGGCCCAGGA GCTGGACGGG CGCGCGGACG GCACGACGCT GGCGCTGTTC GAGCACCGGG GCATCGCGCC GGACGGCGCG GGGGCCGACC TGCCGCTGGC GCGGGCGGGC GCGAACGCGG TGGACATCCT GCGCTTCTTC GCCCGGCTGC GGGCGGAGGG CTGA
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Protein sequence | MHAREEPSAA RARTAPQART QAQPQARPQP PAPVPTPGGP APEGLLALQR QIGNAAVSRL VESGEPVVQR KVGFEFEDSQ WRPWRRVRRN EGILSNARNQ LGGVDQVHPA ERKAVLHRGR GYELEADDTP GPNHSNIEFV TKPFEEDATG VAELQDTIAD MTTVLTRLDG FVGRPGPGQG APPFPLGKAD KANYVRDPEH RLSGSGGLAA RNLLLSGGVK DGAFKMQATS GVPLANLPAV MERLGKDVPG ETARQSADRA PERRLVVQDP AAPNEPMEVQ GSAPTLARRV VTALQQDAAL GPRLTGDTTK LTGFLASVLL TLKLLRRPGG RTAPVKYRLT LLPRNSYAHM FADLPGEQAN ALREHAGLLV DAVVAVSNAR PMIRGDWDAN LTAGSALIAP TPGPLARQAD GQVAHDPPTR RNEALARVGI GTWLVGVTNG TDLLTPAVLQ RWLNGQVDAD VREDAAGAME SFGTAQELDG RADGTTLALF EHRGIAPDGA GADLPLARAG ANAVDILRFF ARLRAEG
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