| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_3350 |
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| Symbol | |
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| ID | 8327540 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 3925037 |
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| End bp | 3925981 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 78% |
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| IMG OID | 644943858 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003101098 |
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| Protein GI | 256377438 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.244541 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCACCAC CGCGCCAGCC CGTCCCCGAC CTCGCGGGCC GCACCGTCGT CGTCACCGGG
ACCACCTCCG GTCTCGGACT CGCGCTCTCC GGCGCGCTGG CCCGCGCGGG CGCCCGCGTC
CTGATGACCG TCCGCGACCC CGAGCGCGGC GCGTCCGCCC TCGCCTGGGT GCGCGACGGG
ATCACCGGCG CCGGTTCCGC CGAGACCGTC CGGCTCGACC TGGCCGACCT CGCGTCCGTG
CGCGCCGCCG CCGCCGACAT CCGGGAGCGC GCGGGCGACC GGGTCGACGT GCTCGTCAAC
AACGCCGCCG TCTCGCTCGG GCCCCGCCAG CTCACCCGCG ACGGGTTCGA GCTCCAGATC
GGCACCAACC ACCTCGGGCC CGCCGCGCTG ACCTGGCTGC TGATGCCCGC CCTGCGCGCC
GCCGGGACCC CGGAGCGGCC CGCCAGGGTG GTGACCACGT CCAGCCTCGG GCACCGCACC
GGCGGGCTCG ACCCCGCCGA CCTGCACTGG GAGCGGCGGA GCTACTCGCC CACCCGCGCC
TACGGGGCGT CCAAGCTCGC GAACCTGCTG TTCGCCGCCG AGCTGGACCG GCGGTTGCGC
CGCGCCGACG ACCCGGTGCT GTCGGTCGCC GCCCACCCCG GCCTGACCAC CTCGCAACTG
CTCGCCAACG CCCTCGCGCG CGGCGGCACC TGGAAGACCC GGCTGTACGC GCTGCCCGAG
CGCTACCTGT CCCAGCCGGT CACCGACGGC ATCCTGCCCC AGCTGCTCGC CGCCACCGGG
CCGGTCGGCG GCGGGGACTA CCTCGGACCC ACCCGGTTGT TCGGCGCCAG GGGACCGGCC
GGGCCCGCGA AGCGCTCGGC CACCGCCCGC GACCCGAGGC TCGCCGCCGA GCTGTGGCGG
GCCACCGCCG CGGCCACCGG CGTCGCGCCC GACCCCGGTG AGTAG
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| Protein sequence | MAPPRQPVPD LAGRTVVVTG TTSGLGLALS GALARAGARV LMTVRDPERG ASALAWVRDG
ITGAGSAETV RLDLADLASV RAAAADIRER AGDRVDVLVN NAAVSLGPRQ LTRDGFELQI
GTNHLGPAAL TWLLMPALRA AGTPERPARV VTTSSLGHRT GGLDPADLHW ERRSYSPTRA
YGASKLANLL FAAELDRRLR RADDPVLSVA AHPGLTTSQL LANALARGGT WKTRLYALPE
RYLSQPVTDG ILPQLLAATG PVGGGDYLGP TRLFGARGPA GPAKRSATAR DPRLAAELWR
ATAAATGVAP DPGE
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