Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_3334 |
Symbol | |
ID | 8327524 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 3910141 |
End bp | 3911040 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644943845 |
Product | short chain dehydrogenase |
Protein accession | YP_003101085 |
Protein GI | 256377425 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACCGAGA ACTGGACCGA GCAGCACGTC CCCGACCAGA CCGGCCGGAC CGCCGTGGTC ACCGGCGCCA ACACCGGGCT CGGCTTCGAG ACCGCGCGGG TGCTGGCCGA ACGCGGCGCG ACGGTCGTGC TGGCCGTCCG CGACGTCGAG AAGGGCAAGC GGGCCGCCGA CCGCATCGCC GGCGAGGTCC TGGTGCAGGA GCTGGACCTG ACCTCGCTCG ACTCGGTCCG CGAGGCCGCC GCCTCCCTGC GCGCCGCCCA CCCCCGGCTC GACCTGCTGA TCAACAACGC GGGCGTCATG TACACCCCCA GGCTCACCAC CCGCGACGGC TTCGAGCTCC AGTTCGGCAC CAACCACCTC GGCCACTTCG CCCTCACCGG CCTGCTGCTG GAGCGCCTCC TGCCCGTCCC CGGCTCCAGG GTGGTCACGG TCAGCAGCAC CGGGCACCGC ATCCAGGCCG CGATCCACTT CGACGACCTG CACTGGGAGC GCTCGTACAG CCGGGCGGGC GCCTACGGCC AGTCCAAGCT CGCGAACCTG ATGTTCACGT ACGAGCTCCA GCGCCGCCTC GCCGCGCACG GCGCCACCGC GGCGGTCGCC GCGCACCCCG GCATGTCCAA CACCGAGCTG GCCCGCAACA CCCCGGCCGC GATCCGCGTC CCGGTCACCT GGCTCGCGCC GGTGCTCACC CAGCCCGCGA CCATGGGCGC GCTGCCGACC CTGCGGGCGG CCACCGACCC GGCGGCGCTC GGCGGGCAGT ACTACGGGCC CGGCGGGCGC GGCGAGGTCA AGGGGCACCC GAGGGTGGTC GCCTCCAGCC CGCAGTCGCA CGACGCGGAG GTCCAGCGGC GGCTGTGGGA CGTCTCCGAG CGCCTCACCG GCGTGGTCTT CCCCGTGTGA
|
Protein sequence | MTENWTEQHV PDQTGRTAVV TGANTGLGFE TARVLAERGA TVVLAVRDVE KGKRAADRIA GEVLVQELDL TSLDSVREAA ASLRAAHPRL DLLINNAGVM YTPRLTTRDG FELQFGTNHL GHFALTGLLL ERLLPVPGSR VVTVSSTGHR IQAAIHFDDL HWERSYSRAG AYGQSKLANL MFTYELQRRL AAHGATAAVA AHPGMSNTEL ARNTPAAIRV PVTWLAPVLT QPATMGALPT LRAATDPAAL GGQYYGPGGR GEVKGHPRVV ASSPQSHDAE VQRRLWDVSE RLTGVVFPV
|
| |