| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_3311 |
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| Symbol | |
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| ID | 8327501 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 3887208 |
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| End bp | 3888134 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 644943823 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003101063 |
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| Protein GI | 256377403 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000847254 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGAGC ACCGGGACGC GGGCGACCGC CCGGCGGAGG TCGTCCTGAT CACCGGCGCG
TCGAGCGGCT TCGGCCGCCT CACCGCGCTG GCGCTGGCCA GGGCCGGGCA CACCGTCGTG
GCCGGGATGC GCGCCACGGC CGACCGCAAC GCCCCCGCCG TCGCCGAGCT CGCCGACCTG
GCGCGGGCCG AACGCCTCGC GCTGTCCGCC GTGGACCTGG ACGTCCGCTC CCAGGAGTCC
GCCGACCGGG CCGTCGCCGA GACCGCGCGC CGCCACGGGC GCCTGGACGT CGTGGTGCAC
AACGCGGGCC ACATGGTCGA GGGCCCGGCC GAGGCGTTCA CCCCCGAGCA GCTGGCCGAC
CTGTACGACG TCAACACCGT CGGCGCCCAC CGCGTCAACC GCGCCGCCCT GCCCCTGCTG
CGCGAGCAGG GCTCCGGGCT GCTGGTGTGG GTGGGCAGCT CGTCCACGCG CGGCGGCCAC
CCGCCGTTCC TGGCCCCGTA CTTCGCGGCG AAGGCCGGGA TGGACGCGCT CGCCGAGAGC
TGCGCGGCCG AGCTGATCCG CTTCGGCGTC GGCACCACCA TCGTCGTGCC CGGCGCGTTC
ACCTCGGGCA CCAACCACTT CGCGAACGCG GGCCGCCCGG CCGACCCCGA CCGCGCCGCC
GCCTACGACC ACCACTACGG CGAGCTGCGC GCCACCATCG GCGACCGCCT GTCCGCGCTC
GTCCCGCAGG ACGCCGACGC GCGGGACGTG GCCGACGAGA TCACCCGCGT CGTCGGCCTG
CCCGCCGACC AGCGCCCGTT CCGCGTCCAC GTCGACCCGA GCCGGGACGG CAGCGAGGTC
GTGTCGGCGG TCGCGGACCG CGTCCGGGTC GAGTTCTACC GCAGGGTCGG CATCGAGGAC
CTGCTGCCCC GCAACGCCGC GCTGTAG
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| Protein sequence | MTEHRDAGDR PAEVVLITGA SSGFGRLTAL ALARAGHTVV AGMRATADRN APAVAELADL
ARAERLALSA VDLDVRSQES ADRAVAETAR RHGRLDVVVH NAGHMVEGPA EAFTPEQLAD
LYDVNTVGAH RVNRAALPLL REQGSGLLVW VGSSSTRGGH PPFLAPYFAA KAGMDALAES
CAAELIRFGV GTTIVVPGAF TSGTNHFANA GRPADPDRAA AYDHHYGELR ATIGDRLSAL
VPQDADARDV ADEITRVVGL PADQRPFRVH VDPSRDGSEV VSAVADRVRV EFYRRVGIED
LLPRNAAL
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