| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_3190 |
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| Symbol | |
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| ID | 8327380 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 3695911 |
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| End bp | 3698670 |
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| Gene Length | 2760 bp |
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| Protein Length | 919 aa |
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| Translation table | 11 |
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| GC content | 78% |
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| IMG OID | 644943707 |
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| Product | transcriptional regulator, putative ATPase, winged helix family |
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| Protein accession | YP_003100947 |
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| Protein GI | 256377287 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3899] Predicted ATPase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.134383 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCTTTC AGCTCTTGGG TCCGCTCGAA GTCGTCGACC GGTCCCGGCC GGTGGCACTC
GGCGGCACCA AGCAGCGCGC CGCCCTCGGC TACCTGCTGC TGCACCCGAA CAGCGTGGTG
CCGACCAGCA GCCTGCTCAA GGCGCTGTGG CCGAAGGACA TGCCGCCCAC CGGGCGCAAG
ATGCTCCAGA ACGCGGTCGC CGCCCTGCGC GGCGTGCTGA CCGCCGCCGG TGACTCGCCC
GGCGCGCCCG CCCTGCTCAC CCACACCCCC GGCTACCTGC TGCGCGTCGA TCCGGAGGAC
GTGGACCTGA GCCGCTTCCG CAGGCTCGTC CACGCCGGGC GCGCCGATCT CACGGCGGGC
TCCTGGCAGC GCGCCGCCCG CACCCTGCGC GACGCGATCG GCCTGTGGCG CGGGCCGCTG
CTGGCCGACC TGGTGGAGCA GGGCGTCGAC TGGCCCGAGC TGGCGGCCGT GCGCAACACC
CGGCTGGCCG CGCTGGAGGA CTGCGTCGAG GCGGAGTTCG CGTCCGGCCG CTACGGCGAG
ATGATCTACG AGCTGGAGCG GTGGGTCGAG GCCGAGCCGC TGCGCGAGCG GCTGTGCGGC
CAGCTCATGC GGGCGCTCTA CCACTGCGGC AGGCAGGCCG ACGCGCTCGG CGTCTACCGG
CGCACCAGGG CCAGGCTGGT GGACGAGCTG GGGCTCGACC CCGGCCGCGA GCTGCGCGAG
CTGGAGCGGG CGATCCTCAA CCAGGAGGTG CCGCACCGGC TCCCGGCCCG GCGCGAGACG
GCGCCCGCCG CGCGGTCCGG GGCGGCCGAG GGCGGTGGCC CGGTCGCCGC ACCCCCGGTC
GCCGCGCTCC CGGTCGGGAT CGTCCCGCAG CGGCAGGCGC CCCCGGCGCC CGCCCCCGTC
ACGCCCGCCC CCGTCGCCCT CGCGCCCCTT CCCCCGGCGT CCGCGCCGAC CGCCGAGCTC
AAGCACGTCA GCGTCCTCAT GGTCCTCACC CGGTTCGAGC ACGACGTGGC CGCAGCCCCG
CCCGAGGAGG TGGACGACGC GCTGAGCGAC GTCGCCGCCG CGGTGCGCGA GGAGGTCGAG
CGCGCGGGCG GCGTGGTCAC CGCCAAGGCC GCGTCGCTGA TCGTCGCCCT GTTCGGCTCC
ACCCGCAGCG GCGAGGACGA CGCCACCAGG GCGGTGCGCG CCGCGCTCGC CGTGCGCGAC
CGGCTCGCCC ACGGTCCGCG CGGCGCCGGA CCCGCCGCGC TCGGCGTCAC CGCCGCCGTC
GCCACCGGGC ACGCCCTGGT GCGGCGCCAC CCTGGGCGCG CGCCCGAGGT CGGCGGCGGC
GTGCTCGACC GCTGCATGAG GCTGCTCGCG CACGTCTCGC CCGGCGAGGT CAGGGTGTGC
GAGGAGACCA GGGGCGCCAG CGAGGGCGCC ATCGGCTACG ACGGCCCCCA CGACCCGGTG
CGCGGGTCCT GGGCCACCGG GGCCAGGCAA GGCGCGGGCG GGACCCCGGC CGCGCCGCCG
CTGGTGGACC GGGACCGCGA GCTGGCCCTG CTGCGCGGCC TGCTGGAGCA GGTCGGCCGC
CGGTCCCGGA CGCACCTGGT GACCGTGCTC GGCGAGCCCG GCATCGGCAA GAGCAGGCTC
GTGGACGAGT TCCAGCGCGT GGCCGAGACC TCGTCGACCG TCGTGGTCCG CTGCCCCCGC
CTCGGCGGAG GGGGCGACCT CGCCCCGCTC GCCGACGCCC TCGCCCCGCG CATGGGCATC
GGCCCCGCCG ACCCGGTCGG GCTGGTCGCC GCCAAGCTCG CCGCCGCCGC GCGCGGCAGC
GGTGGCGCGG GCGAGCGCGC GGACCGGCTG CTGGCCAGGC TGCGCGTCCT GTTCGGGCTC
GACGTGCCCG ACGTGCTCCC GGACGGCTCG TTCGCGGCGT GGCGGCACGT GCTGGAGGAC
CTCGGCGGCG CCGACCCGCT CGTCCTGGTC CTGGAGGACC TGCACTGGGC AGGCGAGGCG
CTGCTGGACT TCGTGGACCA CCTCACCGCC GAGGCCACGT CGTCCCCGCT GCTGGTCGTG
GTCACCGCGC GCCCCGAGCT GTTCGACCGG CGCCCCGCCT GGGGCGGCGG CAAGGCCGAG
GCCAGCACGA TCACGCTCGA CCCGCTCGCC GACCAGGACG TGGAGCGGCT GCTCACCGCC
CTGTGCGTCC GGCGCGGCCC CGCGTCCGCC CCGACCGACG AGGCGCGCGC CGCCTACCGC
GAGGTGATCG CCCACATCGG CGGGAACCCG CTGTTCGCCG TCGAGTACGC CAGGGTGCTC
GCCGACGCGG GCCCGCCGTC CGGGGGCGGC GGGCAGTCGC CGCCGCTGCC GCCGCTGGTG
CGCAGGGTCG TGGCGGCCCG GATCGACAGC CTGCCCGCCG ACGCCAAGGC GGTGCTGCTC
GACGCGGCCG TCCTCGGCGA GGACCTGTGC GAGGAGGGGG TGCGCGCGCT CGGCGGCGGC
GCCGTGCCCG ACGTGGCGCG CGCCCTGGAG CACCTGGAGC GGCGCGAGGT CCTGCGCCGG
GACCGGGACG CCGAGCGCGC CACCGCCTAC GCGTTCCGCA GCCCGCTCGT GCGCGACGTC
GCCTACCTGA CCATCCCCCA GCACGCCCGC GCCGAGAAGC ACCGGCGAGC GGCCGACTGG
TTGGAGCGCG TGCCCGGTCA CGACGCGCTG CGGCTGGTCC ACCACGGGCT CAGGTCGGGC
GGGTGCCGCC CGGTCGAGCC CTCGCCGGTG CTCCCGCAAC CCCGGCAGCA CGCGCGCTGA
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| Protein sequence | MRFQLLGPLE VVDRSRPVAL GGTKQRAALG YLLLHPNSVV PTSSLLKALW PKDMPPTGRK
MLQNAVAALR GVLTAAGDSP GAPALLTHTP GYLLRVDPED VDLSRFRRLV HAGRADLTAG
SWQRAARTLR DAIGLWRGPL LADLVEQGVD WPELAAVRNT RLAALEDCVE AEFASGRYGE
MIYELERWVE AEPLRERLCG QLMRALYHCG RQADALGVYR RTRARLVDEL GLDPGRELRE
LERAILNQEV PHRLPARRET APAARSGAAE GGGPVAAPPV AALPVGIVPQ RQAPPAPAPV
TPAPVALAPL PPASAPTAEL KHVSVLMVLT RFEHDVAAAP PEEVDDALSD VAAAVREEVE
RAGGVVTAKA ASLIVALFGS TRSGEDDATR AVRAALAVRD RLAHGPRGAG PAALGVTAAV
ATGHALVRRH PGRAPEVGGG VLDRCMRLLA HVSPGEVRVC EETRGASEGA IGYDGPHDPV
RGSWATGARQ GAGGTPAAPP LVDRDRELAL LRGLLEQVGR RSRTHLVTVL GEPGIGKSRL
VDEFQRVAET SSTVVVRCPR LGGGGDLAPL ADALAPRMGI GPADPVGLVA AKLAAAARGS
GGAGERADRL LARLRVLFGL DVPDVLPDGS FAAWRHVLED LGGADPLVLV LEDLHWAGEA
LLDFVDHLTA EATSSPLLVV VTARPELFDR RPAWGGGKAE ASTITLDPLA DQDVERLLTA
LCVRRGPASA PTDEARAAYR EVIAHIGGNP LFAVEYARVL ADAGPPSGGG GQSPPLPPLV
RRVVAARIDS LPADAKAVLL DAAVLGEDLC EEGVRALGGG AVPDVARALE HLERREVLRR
DRDAERATAY AFRSPLVRDV AYLTIPQHAR AEKHRRAADW LERVPGHDAL RLVHHGLRSG
GCRPVEPSPV LPQPRQHAR
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