| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_3184 |
|---|
| Symbol | |
|---|
| ID | 8327374 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 3689718 |
|---|
| End bp | 3691043 |
|---|
| Gene Length | 1326 bp |
|---|
| Protein Length | 441 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 644943701 |
|---|
| Product | tryptophan halogenase |
|---|
| Protein accession | YP_003100941 |
|---|
| Protein GI | 256377281 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0644] Dehydrogenases (flavoproteins) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.153347 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGACG CGATCGTGAT GGGTGGTGGG CCCGCCGGGG CCGTCTGCGC CTCGGTGCTC
GCCCGGCAGG GCCGCTCGGT GCTCGTGCTG GAGCGGCAGG AGTTCCCCCG CTTCCACATC
GGCGAGTCGA TGCTGCCGTA CATGGTCGGC CTGCTGGAGC GGCACGGCCT GCTCGACGCG
GTGCGGGAGC AGGGCTACGT CGTCAAGCGC GGCGGCGAGT TCATCGACCC GACGGGCACG
AAGTTCTTCC GCGCCGGGGT GTTCCGCGCC GACTTCGCCA AGACCGGAGA CGGCCGCCAC
CACGAGACGT TCCAGGTCGA GCGCTCGCAC TTCGACCGGG TGAACCTGGA CCAGGCGCGC
GCGGCGGGCG CGACCGTGCG GGAGGGCGCG CAGGTCGTCG GGCTGCTGGA GGAGGGCGGC
CGGGTGGTGG GCGTGCGCTA CCGCGAGGGC GGGGTCGAGC GCGAGGAGCG GGCCCGGTAC
GTGGTGGACG CCACCGGCCG GGCAGGCGTG GTCGCCAACC GGTTCGGGCT GCGGCGGATG
ATCGAGGACC TGCGCATGGT GGCGGTGTTC CACCACCGCG ACGGGCTGGA CGAGGCGCAC
AACCCCGGCC ACGAGGGCGA CATCCAGGTC GGCAGTCACG CGGACGGGTG GATCTGGGCG
ATCCCGCTGT CGGCGGACCG GATCAGCGTG GGCACGGTGA TGCACCGCGA CCGGCTGCGC
GGTCGCACCC CCGCCGAGGC GTTCGCCGAG CACGTCGAGC GGGTGCCCAG GATCAACCAG
CGGCTCACCG GCACCACGGC GACCTCGGAC TTCTGGGTGG AGACCGACTA CAGCTACCAC
TCCGACCAGG TCACCGGCCC CGGCTGGGTG ATGGTCGGGG ACGCGGGCTG CTTCGGCGAC
CCCATGTTCT CCGGCGGGGT GCTGGTGGGC ATGGCCACCG GCGCGGAGGC CGCCGAGGCG
CTCGGGCGGG CGCTCGACTC GCCCGCCGAC GAGGAGCAGG CGCTCACCGG CTACTCGAAC
TTCTTCAAGA CCGGCTACGA CACGTACGTG CGGCTGATCT TCTCCTTCTA CGAGGGCGAG
CTGCTGCCCG CGCTGGCCGA GGCGCACTCG GAGGCGGGGG ACCTCTCCGA GGCGGACATG
GAGATGTACG TGGTGCGGCT GCTGGGCGGC GACTTCTGGA GCGCGCGCAA CCCGGTGGCG
AACGCGCTGC GCGCGAACCC GGCGTGGTCG ACGTTCTCGC CGTTCGAGCC GGTGCACCGC
TGCCCGGTGT ACCCGGAGCT GGACGTGGCG GAGCTGGGCG GCCTCGCGGG CGCGGTCGGC
CGGTGA
|
|---|
| Protein sequence | MLDAIVMGGG PAGAVCASVL ARQGRSVLVL ERQEFPRFHI GESMLPYMVG LLERHGLLDA
VREQGYVVKR GGEFIDPTGT KFFRAGVFRA DFAKTGDGRH HETFQVERSH FDRVNLDQAR
AAGATVREGA QVVGLLEEGG RVVGVRYREG GVEREERARY VVDATGRAGV VANRFGLRRM
IEDLRMVAVF HHRDGLDEAH NPGHEGDIQV GSHADGWIWA IPLSADRISV GTVMHRDRLR
GRTPAEAFAE HVERVPRINQ RLTGTTATSD FWVETDYSYH SDQVTGPGWV MVGDAGCFGD
PMFSGGVLVG MATGAEAAEA LGRALDSPAD EEQALTGYSN FFKTGYDTYV RLIFSFYEGE
LLPALAEAHS EAGDLSEADM EMYVVRLLGG DFWSARNPVA NALRANPAWS TFSPFEPVHR
CPVYPELDVA ELGGLAGAVG R
|
|---|
| |