Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_3160 |
Symbol | |
ID | 8327350 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 3649919 |
End bp | 3651133 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644943677 |
Product | protein of unknown function DUF955 |
Protein accession | YP_003100917 |
Protein GI | 256377257 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2856] Predicted Zn peptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.208418 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGTTCTC GTACACCGAC GACCGACCGG GCGGCGGACG CCGCCGCGCT CTTCGACGGA ACCCGCCTGA CCCTGGCCCG TCACCTCGCG GGGCTGCGCA AGAGCGACCT GGCCAACAAA GTGGAGAAGA GCCCGACCGC CGTGGCGGCC TGGGAGTCCG GCGCGAAGCG GCCCACCGCG GCGACCGTGG CCCAGCTGGC GCTGGGCCTG TCGGTCGAGC CGGGGTTCTT CGCGGTGCGC CCGGACGACG TGACCGCGCT CGGCAGCGCG CCGCACTTCC GCTCGTTGCG CTCGACCAGC CAGCTCACCC GCGACCAGGC CTACGCCTAC GGGCGGCTGG CGGTGGACAT CGCGGCGGGC TTGGAGCGGC ACGTCGAGTT CCCCGAACCC GACGTGCCGA GCCTGCCCGT GGCGGTCGAC GACCGGGACG GCGACGGCCC CGAGCGCGCG GCGCGGCTCG TCAGGCGGCA CTGGGGCGTC GCGGACGGTC CCGTGGGGCA CCTGATCCGG TTGCTGGAGA ACCGGGGGGT GCTGGTGGTC TTCAGCCCCG AGCAGACGGC GTCCGTGGAC GCCTACTCCT TCGACACCCG GCTGCGCCCG GTCGTGGTCC TGAACCCGAT CAAGCGCGAC TACTACCGCC AGCGCTTCGA CGTGGCGCAC GAGCTGGGGC ACCTCGTCAT GCACGGCGAC GCCGAACCGG GGGGCCGGAT CGTCGAGGAG CAGGCGCACC GCTTCGCCGC CGAGCTGCTG ACGCCCGCCG ACCAGGTGCT GGACCTGCTC CCGGCCACGA TGGGCGGCGA CGTCTGGCGG TCGCTGGCCA GGACGAAGGA GCAGTGGGGG GTGAACATGC AGGCCCTGCT CTACCGGGCC CGCTGGCTCG GCAAGCTCGG CGACGTGTCC TACCGCAACG CCATGACGAC CATCTCCACC AGGGGGTGGC GGCGGAACGA GCCCGGTCTG GTCGACGCCA TCGAGCAGCC GTCGCTGCTG CCGCGCGCCG TGGAGCTGCT CGCGCAGGAG GGGATCGACG AGGGGAGCCT GGTCGCGCAG TGCCGGGTGC CGGTCGACCT GTTCCACACC ATCACGTCAC GGACGCCCGA GCAGCCGTGG GCCGACCTCG CCCCGTCGGA CGGCGGAAGC GCGGACCACC GCGACGGCCC GCGCGTGCTG TCGCTCCTGG ACAGGCGGGC GAGGCGGGCC GCGCGGTCGA ACTGA
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Protein sequence | MSSRTPTTDR AADAAALFDG TRLTLARHLA GLRKSDLANK VEKSPTAVAA WESGAKRPTA ATVAQLALGL SVEPGFFAVR PDDVTALGSA PHFRSLRSTS QLTRDQAYAY GRLAVDIAAG LERHVEFPEP DVPSLPVAVD DRDGDGPERA ARLVRRHWGV ADGPVGHLIR LLENRGVLVV FSPEQTASVD AYSFDTRLRP VVVLNPIKRD YYRQRFDVAH ELGHLVMHGD AEPGGRIVEE QAHRFAAELL TPADQVLDLL PATMGGDVWR SLARTKEQWG VNMQALLYRA RWLGKLGDVS YRNAMTTIST RGWRRNEPGL VDAIEQPSLL PRAVELLAQE GIDEGSLVAQ CRVPVDLFHT ITSRTPEQPW ADLAPSDGGS ADHRDGPRVL SLLDRRARRA ARSN
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