| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_3044 |
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| Symbol | |
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| ID | 8327234 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 3519594 |
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| End bp | 3520670 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644943569 |
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| Product | rhamnose ABC transporter, periplasmic rhamnose- binding protein |
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| Protein accession | YP_003100809 |
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| Protein GI | 256377149 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | [TIGR02637] rhamnose ABC transporter, rhamnose-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00338498 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCCCAA CCCCCACCGC CCGCGTCCGC ACCGCCGCCC TGGTGGCCGC GCTGCTGGTC
GGGCTCACCG CCTGCGGCGG CACCACCAAG GGCGACGGCG ACCCCGGAGC GGCGAGCGGC
GGTCCCACCG CGAGCGCCGA CCCGGACGCG CCGCTGCGCG AGGGCGTGAA GATGGCGTTC
CTGCCCAAGC AGCTCAACAA CCCGTACAGC GACATCGAGG GCGAGGGCGG CAAGGAGGGC
GTCGAGGAGC TGAAGGGCGA GTTCAAGCTC GTCGGCCCCA ACGACGCCAG CGCCTCCTCC
CAGGTCAGCT ACATCAACAC GCTGATCCAG CAGCAGCAGG ACGTCATCGG CATCGCCGCC
AACGACCAGA ACGCGGTGTG CCCCTCGCTC AAGCAGGCGC GCGAGGCGGG CATCAAGGTC
GTCTCGTTCG ACTCCGACGC CGCGAAGGAC TGCCGCGACG TGTTCGTCAA CCAGGCCACC
GCGCAGGGCA TCGGCGAGAA GCTCGTGGAG ATGGCCTCGC AGCTCGCCGG CGGCTCCGGG
GAGATCGCGG TCCTGTCCGC GACCCCCAAC GCCACCAACC AGAACGCCTG GATCGCGGTC
GTCGAGACCG AGCTGGCCAA GCCGCAGAAC TCCGGGCTCA AGCTGGTGAA GACGGTCTAC
GGCAACGACG ACGACCAGAA GTCCTTCCAG GAGGCCCAGG GCCTGCTCCA GGCGCACCCT
GACCTGGAGG TCATCGTCGC CCCCACCACG GTCGGCATCG CCGCCGCCGC CCGCTACGTC
GGCTCCTCCA GCTACAAGGG CAAGGTCGCC GTGACGGGCC TGGGCACCCC CAACCAGATG
CGCGAGCACG TCAAGAACGG GACCGTGGAG CGGTTCGCGC TGTGGGACCC GGCCGACATC
GGCTACCTCG CCGCGCACGC GGGCGTCGCC CTCGCCTCCG GCCGCATCAC CGGCGCGCAG
GGCGAGGAGT TCACGGCGGG CAGGCTCGGC GACTACACGA TCGGCGCGGA CGGCGAGGTC
GTCCTCGGCC CGCCCACGGT GTTCGACGCC GCCAACATCG ACCAGTTCGA CTTCTGA
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| Protein sequence | MSPTPTARVR TAALVAALLV GLTACGGTTK GDGDPGAASG GPTASADPDA PLREGVKMAF
LPKQLNNPYS DIEGEGGKEG VEELKGEFKL VGPNDASASS QVSYINTLIQ QQQDVIGIAA
NDQNAVCPSL KQAREAGIKV VSFDSDAAKD CRDVFVNQAT AQGIGEKLVE MASQLAGGSG
EIAVLSATPN ATNQNAWIAV VETELAKPQN SGLKLVKTVY GNDDDQKSFQ EAQGLLQAHP
DLEVIVAPTT VGIAAAARYV GSSSYKGKVA VTGLGTPNQM REHVKNGTVE RFALWDPADI
GYLAAHAGVA LASGRITGAQ GEEFTAGRLG DYTIGADGEV VLGPPTVFDA ANIDQFDF
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