Gene Amir_3038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_3038 
Symbol 
ID8327228 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp3512891 
End bp3513631 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content73% 
IMG OID644943563 
Productprotein of unknown function DUF224 cysteine-rich region domain protein 
Protein accessionYP_003100803 
Protein GI256377143 
COG category[C] Energy production and conversion 
COG ID[COG0247] Fe-S oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCTGGGG TGAGAGTCGC GCTGTTCGTG ACGTGCCTGG TGGACGGCCT GTTCCCCCAG 
GTGGGCAAGG CGACCGCCGC GCTGCTGGAG CGGCTGGGCC ACGAGGTCGT CGTGCCGCGC
GGGCAGACCT GCTGCGGGCA GATGCACGTC AACACCGGGT ACGCCGAGCA GGCCGTTCCG
GTGATCCGCA ACCACGTGCG GGCGTTCGCC GACGCGGACG TGGTGGTCGC GCCCTCAGGG
TCGTGCGCGG GGTCGATCCG GCACCAGCAC GCGAAGGTCG CCGCCCAGCA CGGGCACGCG
CGGCTGGCGG AGCGGGCCGA GGAGGTCGCG GGGCGCACCT ACGAGCTGTC GGAGTTCCTG
GTGGACGTGC TGGGCGTGAC CGACGTGGGC GCGTACTTCC CCCACCGGGT GACGTACCAC
CCGACGTGCC ACTCGCTGCG CGTGCTCGGT GTGGGCGACA AGCCGCTGCG GCTGCTGCGC
GAGGTGCGCG GCATCGACCT GGTGGAGCTG CCGGGCGCGG AGACGTGCTG CGGGTTCGGC
GGGACGTTCG CGCTGAAGAA CTCGGAGACG TCCGCGGCGA TGCTGGCGGA CAAGATGAGC
GCGGTGCTGT CGACCGGCGC GAAGGTGCTC ACGGCGGGCG ACTCGTCGTG CCTGATGCAC
ATCGGCGGCG GGCTGTCCCG GTTGCGCAGC GGCACCAGGG CGCTGCACCT GGCGGAGGTG
CTGGCGGGGG TGGCGCGGTG A
 
Protein sequence
MPGVRVALFV TCLVDGLFPQ VGKATAALLE RLGHEVVVPR GQTCCGQMHV NTGYAEQAVP 
VIRNHVRAFA DADVVVAPSG SCAGSIRHQH AKVAAQHGHA RLAERAEEVA GRTYELSEFL
VDVLGVTDVG AYFPHRVTYH PTCHSLRVLG VGDKPLRLLR EVRGIDLVEL PGAETCCGFG
GTFALKNSET SAAMLADKMS AVLSTGAKVL TAGDSSCLMH IGGGLSRLRS GTRALHLAEV
LAGVAR