Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_2986 |
Symbol | |
ID | 8327175 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 3451844 |
End bp | 3454093 |
Gene Length | 2250 bp |
Protein Length | 749 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644943511 |
Product | alpha-xylosidase YicI |
Protein accession | YP_003100752 |
Protein GI | 256377092 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1501] Alpha-glucosidases, family 31 of glycosyl hydrolases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.391132 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAGTTCA CCGACGGGTA CTGGCTTCTC CGACCGGGCG TCACCGCCCA CTTCCCCCAG CACGTGCACG ACGTGGAGCC CGGCGACGGG ACCCTGACCG CGCACGCGCC CACCCACCGC GTCCGGCACC GGGGCGACCT GCTCAAGGGC CCGGTCGCCA CGATCGGCCT GTCCTCCCCG ATGCCGGACG TGGTGCGGGT GTCGGTCACC CACTTCTCCG GCGGCCACGA CGAGGTCGGC TTCGAGCTGT CCACCGAGGA CGGTCACCGG CCGAAGGTCG AGGTGGACGA GCAGTTCGCC ACCCTCACCT CGGGCTCCCT CACCGCGCGG GTCCACCGCG GCGAGGACTG GCGCCTGGAG TTCACCGCCG ACGGCCGCAC CCTGACCTCC AGCGACGCCA AGGCCATGGG CTTCATGACC CTGGACGGCG AGCACCACGT CCGCGAGCAG CTCGCGCTCG GCGTCGGCGA GGTCGTCTAC GGCATGGGCG AGCGCTTCGG CCCGCTCACC CGCAACGGCC AGGTCGTCGA CATCTGGAAC GCCGACGGCG GCACCAGCAG CGAGCAGGCG TACAAGAACG CCCCGTTCTA CCTGACCAGC GCCGGGTACG GCGTGTTCGT CGACCACCCC GGCAAGGTCT CCTTCGAGGT CGGCTCCGAG GCCGTGTCCA GGGTCGGCTT CAGCGTCCCC GGCCAGCGGC TGGACTACCT GGTCATCCAC GGCCCCACGC CGAAGGAGGT GCTGCGCAAG TACACCGCCC TCACCGGCCG CCCCGCGCTG CCCCCGGACT GGTCGTTCGG CCTGTGGCTG TCCACCTCCT TCACCACCTC CTACGACGAG AAGACCGTCA CCGGCTTCAT CGACGGCATG GCCGAGCGCG ACCTGCCGCT GAGCGTCTTC CACTTCGACT GCTTCTGGAT GCGCGGCCTG CACTGGTGCG ACTTCGAGTG GGACCCGGAG GTCTTCCCGG ACCCCGAGGG GATGCTGGCC CGCCTCAAGG AGCGCGGCCT GAGCATCTCG GTGTGGATCA ACCCGTACAT CGCCCAGCGC TCCCCGCTGT TCGAGGAGGG GAGGAAGGCC GGCTACCTGC TGCGCCGCCC CACCGGCGAG GTGTGGCAGT GGGACCTGTG GCAGCCCGGC ATGGCCCTGG TGGACTTCAC CAACCCCGAG GCCCGCGACT GGTACGCCGG GAAGCTGGAG CGCCTGCTGG ACCAGGGCGT CGACTGCTTC AAGACCGACT TCGGCGAGCG CGTCCCCACC GACGTCGTCT ACCACGACGG CTCCGACCCG GAGCGGATGC ACAACCTCTA CACCCACCTG TACAACAAGA CCGTCTTCGA CCTCCTGCTG CGCCGCAAGG GCGAGAACGA GGCCGTGGTC TTCGCCCGCT CCGCCACCGC CGGGACCCAG CAGTTCCCGG TGCACTGGGG CGGCGACAGC GAGTCCAGCT ACGCGGCCAT GGCGGAGAGC CTGCGCGGCG GCCTCTCCCT GGGGCTCACC GGGTTCGGCT TCTGGAGCCA TGACATCGGC GGCTTCGAGG GAACCCCGGA CCCGGACCTG TTCAAGCGCT GGACGGCCTT CGGCCTGCTG TCCTCGCACA GCAGGCTGCA CGGCAGCTCC TCGTACCGCG TCCCGTGGGC GTTCGACGAG GAGGCGGTGG ACGTCCTGCG CCGCTTCACC AAGCTCAAGC TGGGCCTCAT GCCGTACCTG AAGAACGCGG CGAGGCAGGC GGCCGAGCAC GGCGTGCCGG TGATGCGGGC CATGGCGCTG GAGTTCCCGC ACGACCCGGC CTGCGCCCAC CTGGACCGCC AGTACATGCT CGGCGACGAC CTGCTGGTGG CCCCGGTCTT CACCCCGACC GGCGAGGTGG AGTTCTACGT CCCGGAGGGC GTCTGGACCA GCCACCTGAC CGGTGAGCGC CTGACCGGCC CCCGCTGGCA CCGGCAGACC CACGACCACC TCTCGATCCC GCTCCTGGTG CGCCCCGGCG CGGTGGTCCC GGTCGGCGCG GTGGACGACC GCCCGGACTA CGACCACGCC GAGGGCGTCT CCCTGCACTG CCACGAGCTC GCCGACGGCA GCGCCACCGA GGTCCGCGTG GGCGAGTCGC GCTTCACCGT CCACCGCGAC GGCGACACCG TCCGCGCGAC CGCCCGGAAC CCGCCCGCGC ACTGGCGGCT GGTGCTGCCC GGCGGGCGGT CGGTCGACGC GGAGAACGGC GTCGCGGAAG CGGGAAGCGT GAGCTGGTGA
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Protein sequence | MKFTDGYWLL RPGVTAHFPQ HVHDVEPGDG TLTAHAPTHR VRHRGDLLKG PVATIGLSSP MPDVVRVSVT HFSGGHDEVG FELSTEDGHR PKVEVDEQFA TLTSGSLTAR VHRGEDWRLE FTADGRTLTS SDAKAMGFMT LDGEHHVREQ LALGVGEVVY GMGERFGPLT RNGQVVDIWN ADGGTSSEQA YKNAPFYLTS AGYGVFVDHP GKVSFEVGSE AVSRVGFSVP GQRLDYLVIH GPTPKEVLRK YTALTGRPAL PPDWSFGLWL STSFTTSYDE KTVTGFIDGM AERDLPLSVF HFDCFWMRGL HWCDFEWDPE VFPDPEGMLA RLKERGLSIS VWINPYIAQR SPLFEEGRKA GYLLRRPTGE VWQWDLWQPG MALVDFTNPE ARDWYAGKLE RLLDQGVDCF KTDFGERVPT DVVYHDGSDP ERMHNLYTHL YNKTVFDLLL RRKGENEAVV FARSATAGTQ QFPVHWGGDS ESSYAAMAES LRGGLSLGLT GFGFWSHDIG GFEGTPDPDL FKRWTAFGLL SSHSRLHGSS SYRVPWAFDE EAVDVLRRFT KLKLGLMPYL KNAARQAAEH GVPVMRAMAL EFPHDPACAH LDRQYMLGDD LLVAPVFTPT GEVEFYVPEG VWTSHLTGER LTGPRWHRQT HDHLSIPLLV RPGAVVPVGA VDDRPDYDHA EGVSLHCHEL ADGSATEVRV GESRFTVHRD GDTVRATARN PPAHWRLVLP GGRSVDAENG VAEAGSVSW
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