Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_2873 |
Symbol | |
ID | 8327062 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 3315415 |
End bp | 3316509 |
Gene Length | 1095 bp |
Protein Length | 364 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 644943406 |
Product | periplasmic binding protein |
Protein accession | YP_003100647 |
Protein GI | 256376987 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4558] ABC-type hemin transport system, periplasmic component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGCGGAC GTCTCCGAGC TGCCCTGCTG ACCTGCGTGG CGGGACTGCT CGCCGGGTGC GTCGCCGTCC CACCGCCCGG CGCCGCCGAG GAACCCGCGC GACCGGGCGC GCCCCGCACC CCGCTGGCCC AGCTCACCGG CCTCGCCGAC CCCAGGAGCC ACACCGGTCC CACGACCGCC GTCGTCGAGC AGGCCGACAT CACCCCCGTC GCCACCGACC CGAGGCCCGC GCTCCCGGCC ACCGTCACCG ACGACCAGGG CGCCAGCGTC ACGGTCACCG ACGCCTCCCG CATCCTCGCC CTCGACGTCT CCGGAACCCT CGCCGCCACC GTCTTCGGGC TCGGCCTCGG CCCGAACGTC GTCGGCCGCG ACGTCTCCAC CGGCTTCCCC GCCGCCCAGG ACCTCCCGCT GGTCACCGTC AACGGCCACC AGCTCAACGC CGAGGCCATC GTCAACCTCC GCCCCACCGT GATCCTGACC GACACCACCC TCGGCCCGTG GGACGCGATG CTCCAGCTGC GCGACATGGG CGTCCCGGTC GTCGTCGTGA CCCACAAGCG CGGCATGGAC ACCAACGCCG CCATCGTCCA CGACGTCGCC GCCGCGCTCG GCGTCCCCGA GCAGGGCCGG GCGCTCGCCG ACCGCATGGC CCGCGAGATC GCCGCGACCA CCGAGGCCGT CTCCCGCCTC GCGCCCGCCG AACCGGACCG CAAGCTCCGC GTCGTCTTCC TGTACCTGCG CGGGCAGGCC GGGGTGTACT ACCTGTTCGG CAAGGGGTCC GGCGCGGACT CGCTGATCAC CGCGCTCGGC GCGGTCGACG TGGCCACCGA GGTCGGCATC GACGGGATGC GCCCGGTCAA CCCCGAGGCG CTCACCAGGG CCAAGCCCGA CGTGATCCTG ATGATGACCA AGGGCCTGGA GTCGGTCGGC GGCGCGGAGG GCGCGCTGGA GGTGCCCGGC ATCGCGCAGA CCCCGGCGGG GGAGCGCCGC AGGTTCGTGG ACATGAGCGA CCACCAGGTG CTCGGCTTCG GCCCGCTCAC CGCCTCGGTC CTGGACGGCC TCGCCCGCGC CCTGTACGCG CCGGAGGGCT CGTGA
|
Protein sequence | MRGRLRAALL TCVAGLLAGC VAVPPPGAAE EPARPGAPRT PLAQLTGLAD PRSHTGPTTA VVEQADITPV ATDPRPALPA TVTDDQGASV TVTDASRILA LDVSGTLAAT VFGLGLGPNV VGRDVSTGFP AAQDLPLVTV NGHQLNAEAI VNLRPTVILT DTTLGPWDAM LQLRDMGVPV VVVTHKRGMD TNAAIVHDVA AALGVPEQGR ALADRMAREI AATTEAVSRL APAEPDRKLR VVFLYLRGQA GVYYLFGKGS GADSLITALG AVDVATEVGI DGMRPVNPEA LTRAKPDVIL MMTKGLESVG GAEGALEVPG IAQTPAGERR RFVDMSDHQV LGFGPLTASV LDGLARALYA PEGS
|
| |