Gene Amir_2720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_2720 
Symbol 
ID8326909 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp3131153 
End bp3131938 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content74% 
IMG OID644943260 
ProductABC transporter related 
Protein accessionYP_003100501 
Protein GI256376841 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.250135 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCGCGC GCTTGACCGC CAGGGACGTG ACCCTGCGCT ACGGGGAGCG GGTCGTGTCG 
ACCCGGCTCG CCCTCGACGT GCCGGACGGG GCGTTCACCG CCGTCGTCGG GCCCAACGCC
TGCGGGAAGT CGACGCTGCT GCGCGCGTTC GCGCGGCTGC TCAAGACCTC CGGCGGGGAG
GTGGCGTTCG ACGGGAGGCC GGTGGGCGAC TACCCGACGA AGGCGCTGGC CCGCTCGCTC
GGGTTCCTGC CGCAGGAACC CGTCGCGCCG GAGGACATCC GGGTGCGGCA GCTGGTGGCG
CGCGGCCGGT TCCCGCACCA GTCGCTGCTG TCGACCTGGT CGGAGCAGGA CGAGGCCGCC
GTCGCGCGGG CCGTCGCGGC GGCCGGGGTG GCGGAGCTGG TGGACCGGCC GGTGCGGGAG
CTGTCCGGCG GGCAGCGGCA GCGGGTGTGG GTGGCCGTGG TGCTGGCCCA GGACACGCCC
TACCTGCTGC TGGACGAGCC GACGTCCTTC TTGGACCTGA CGCACCAGTA CCAGTTGCTG
GAGCTGCTGG CGGGGTTGCG CGACGAGGGG CGGACCGTGA TCGCGGTGCT CCACGACGTC
AACCAGGCCT GCCGGTACGC CGACCACCTC GTGGCGATGC GCGACGGGCG CGTGGTCGCG
GAGGGCGCGC CGTCCGAGAT CGTGGACGCC GCGCTGGTGC GGGAGGTGTT CGACCTGCCG
AGCGTGGTGG TGCCGGACCC GGTGACCGGC ACGCCGATGG TCGTGCCGGA CCTCAGAGCC
TGCTGA
 
Protein sequence
MTARLTARDV TLRYGERVVS TRLALDVPDG AFTAVVGPNA CGKSTLLRAF ARLLKTSGGE 
VAFDGRPVGD YPTKALARSL GFLPQEPVAP EDIRVRQLVA RGRFPHQSLL STWSEQDEAA
VARAVAAAGV AELVDRPVRE LSGGQRQRVW VAVVLAQDTP YLLLDEPTSF LDLTHQYQLL
ELLAGLRDEG RTVIAVLHDV NQACRYADHL VAMRDGRVVA EGAPSEIVDA ALVREVFDLP
SVVVPDPVTG TPMVVPDLRA C