| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_2680 |
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| Symbol | |
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| ID | 8326869 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 3019338 |
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| End bp | 3021143 |
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| Gene Length | 1806 bp |
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| Protein Length | 601 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644943220 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_003100461 |
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| Protein GI | 256376801 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTCCAG GCCCACGTGC GGGCAAGCGT GAGTGGTGGG GGCTGGCCGT CCTCGTCCTC
GTCACCCTCA TCATCAGCAT GGACATGACC GTGCTGTCCT ACGCGCTGCC CTTCATCAGC
GTCGAGTTAG GCCCGTCCAG CAGTCAACTC CTGTGGATCA CGGACATCTA CGCGTTCGTC
CTCGCCGGAC TGCTGATCCC CATGGGCACC CTCGGCGACC GGATCGGCAG GCGCAAGCTG
CTGATCGTCG GAGCCGTCGC GTTCGGAGTG GCCTCCGCGC TGTCCGCCTA CGCCAGCTCC
CCGGAGCTGC TGATCGGCAC GCGCGCCCTC ATGGGCGTCG CGGGCGCGAC CCTCATGCCC
TCCACGATGT CGTTGATCCG CACCATGTTC CAGGACGCCC AGCAGCGCCG CGCCGCGATC
GGCCTGTGGG CCACCGGCTT CTCCGCCGGT GGCGCGCTCG GCCTGCTGCT CGGCGGCGTG
CTGCTCCAGA GCTTCCACTG GGGCACGGTC TTCCTGGTCA ACGTCCCCAT CATGCTCGTG
CTCGTCGTCG CCGCCCCGCT GCTGCTCCCC GAGTACCGCA ACCCCGGCGC GGGCAAGTTC
GACCTCTTCA GCTCCGCGCT GCTGTTCGCC GCCGTGCTCC CGGTCGTCTG GGGCGTCAAG
GAGCTGGCGG AGCGCGGGAT CGGCTGGCCG CCCTTCGCGG GCATCGCGCT CGGACTCGTG
CTGCTGCCGG TGTTCCTGGT GCGCCAGAAC AAGGCCGACG ACCCGATGCT CGACGTGAGC
CTGTTCCGCA AGGCCGCGTT CTCGGCGGCG CTGGCCACCA ACGTCCTCGC CAACTTCGCG
ATGATCGGCT TCATGTTCTT CACCAGCCAG TACCTCCAGC TGGTGCTCGG GCTGGAACCG
TTCGAGGCAG GCCTGTGGTC GCTGCCCCAG GCGTTCACCG GCGCGCTCGG CGCGGCCCTG
TTCGCCCCGG TCCTCGTCGC GAAGCTGCGC TACTCGCGGG TGGTCGCGCT CGGCCTGCTG
CTGGGCGTCG GCGGTTCCGT GGTCATGTCG CAGGTGCGGG TCGAGGACGG GCTCGCGCAG
GCCATCGTCG GCCAGTCGCT CAGCGCCATG GGCCTGGCGA TGGTGCTGAC CCTGACCGCG
GAGCTGGTCG TCACCACCGC GCCGCAGGAG CGCGCGGGCG CCGCGTCCGG GCTGTCCGAG
ACGGGCAGCC AGTTCGGCGG CGCGCTCGGC GTCGCGGTGC TCGGCAGCCT CGGCGCGTTC
GTCTACCGCT CCGAGCTCAC CGAGCTGAGC CCGGCCGGGG TGTCCCCGGA CGTGCTGACC
ACCGCCAAGG AGACGCTCGG CTCGGCCGTC GAGGTCGCCG CCGCGCTGCC CGCCGCCACC
GGGGACGCGC TGAACCTGGC CGCCAGGACC GCGTTCACCC ACGAGGTGCA GGTCTCGGCC
TGGTCGGTGG CCGGGGTGCT GCTGCTCACC ACCTTCGTCG CCGCCGCGCT GCTGGCCAAG
GTCCCCCGCC CCGGCCCCGC GCCCGACGCC GCCGTGGAGG CGGCGACCGA GGCCGCCGCC
GACGCCACCC CCGAGGTCGA CCCCGACGGC GACGCCGGGA CCCCTGTCGC AGGGGGGAGC
GCCGAGGAGG GGGCCGCCGC CGAGACCTCT GGCAAGACCC CTGGGAAGAG CGCAGGGAAG
GCCGCGGGGA AGCCCGCCGC GCACCCCGTT GCCGATCCCG CCCGCGACGC CCCGGAGCCC
GCCCCGGAGC TCCCGGTCGC CCTGGTCAGC CCCGTGAAGG ACGACGAGGG CTCGCTCGTC
ACCTGA
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| Protein sequence | MTPGPRAGKR EWWGLAVLVL VTLIISMDMT VLSYALPFIS VELGPSSSQL LWITDIYAFV
LAGLLIPMGT LGDRIGRRKL LIVGAVAFGV ASALSAYASS PELLIGTRAL MGVAGATLMP
STMSLIRTMF QDAQQRRAAI GLWATGFSAG GALGLLLGGV LLQSFHWGTV FLVNVPIMLV
LVVAAPLLLP EYRNPGAGKF DLFSSALLFA AVLPVVWGVK ELAERGIGWP PFAGIALGLV
LLPVFLVRQN KADDPMLDVS LFRKAAFSAA LATNVLANFA MIGFMFFTSQ YLQLVLGLEP
FEAGLWSLPQ AFTGALGAAL FAPVLVAKLR YSRVVALGLL LGVGGSVVMS QVRVEDGLAQ
AIVGQSLSAM GLAMVLTLTA ELVVTTAPQE RAGAASGLSE TGSQFGGALG VAVLGSLGAF
VYRSELTELS PAGVSPDVLT TAKETLGSAV EVAAALPAAT GDALNLAART AFTHEVQVSA
WSVAGVLLLT TFVAAALLAK VPRPGPAPDA AVEAATEAAA DATPEVDPDG DAGTPVAGGS
AEEGAAAETS GKTPGKSAGK AAGKPAAHPV ADPARDAPEP APELPVALVS PVKDDEGSLV
T
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