Gene Amir_2679 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_2679 
Symbol 
ID8326868 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp3018623 
End bp3019255 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content71% 
IMG OID644943219 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003100460 
Protein GI256376800 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.569392 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGGCCACC GTGACCAGCT CCTCGACGGG GCGAAGAAGT GCCTGTACGA ACGCGGTTAC 
TCGAACACCA CGGCACGTGA CATCGTCGCG GCGTCGAACA CGAACCTGGC CTCGATCGGA 
TACCACTTCG GCTCCAAAGA GGCCCTGCTC AGCGCCGCGC TCGTCTCGGC GTTCGAGGAG 
TGGGGCAACG AGCTTGACCG GGTCATGGCC GACGTCGGCA CCGACCCGAC GGTCGCGGGC 
AGGCTGGAGA CCATGTGGGC CGGGGTGCTG GAGTCCATCA CCACGCACCG GCCGCTGTGG 
GTGGCGGGCA TCGAGGCGTT CTCGCTGGCG GAGCGGATGC CCGACCTGCG CGAGAAGCTC 
GCGTCCACCT ACCGCCGCGC CCGGCCCTCG CTGGGGCAGC TGACCCTGGC GGGCACGGAC 
GCCGAGGAGC GCACCCGCCT CGCGGCGGGC TCGTTCCTGC TGGCGGTGAT GACCGGGCTG 
ACCGTGCAGA GCCTGCTCGA CCCCGAGGCG GTGCCCGAGG CGAGCGACCT GATCACGGCC 
GTGCGCTCGA TCTTCGGCCG CTTCGACGTG CAGCTCGCCC CGGAGGACGA CCCGCTGGCG 
CAGCCGGGCG ACGCAAAGCC GGAGTCCGGG TAG
 
Protein sequence
MGHRDQLLDG AKKCLYERGY SNTTARDIVA ASNTNLASIG YHFGSKEALL SAALVSAFEE 
WGNELDRVMA DVGTDPTVAG RLETMWAGVL ESITTHRPLW VAGIEAFSLA ERMPDLREKL 
ASTYRRARPS LGQLTLAGTD AEERTRLAAG SFLLAVMTGL TVQSLLDPEA VPEASDLITA 
VRSIFGRFDV QLAPEDDPLA QPGDAKPESG