| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_2674 |
|---|
| Symbol | |
|---|
| ID | 8326863 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 3012438 |
|---|
| End bp | 3013211 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 644943214 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003100455 |
|---|
| Protein GI | 256376795 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00000423316 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGTCACCG GGTCCGGCAT GGGCGGGCTC GCCGCCGCCA GGGCGCTGGC CGAGTTCGGG
GACCGGCGGG TGCTCGTGCT GGAGCGGCAC CACGTCCTCG GGGGCATGAC GCACGACTAC
GACGTCCTGC ACTTCCCCGA CCCGACCTCG CCGCGCACGA GGAGCGCTTC CCCGAGGTCT
TCCGCACCGT CGACGAGCAC CTCGCGACCC GCTTCCGAGA CCCCCGCCTG CGCCAGATCC
TCGCCGCCCG CTCCGACCTC CACGGCCCCA CCCCGGACCG CGCCGCTCCA GGCGGAAGGC
GGGCGGTCCT GCCTGGTGCT GTTCCTCGGG TTCGACCGGT CGCCCGCCGA GTTCGGGCTG
CGCGGCGAGA ACCACTCGTT CGTCGACCCG CCCACCGCGG ACCGCTGGCG CGACGGCAAG
GACGCGGCCT GCGGGCAGTT CAAACGCGAC ACCACCCGCC GAGTCCTGGA CCGGATGGAC
GCGCGGTGGC CGGGGTTCAG CGACGCCGTC GCGTTCGCCG AGCTCGCCAC CCCGCTCACG
TTCGAGACCT ACCAGAACAG CCACCGCGGC GTCTTCTACG GCCTGCCCGC CACCCCCGAC
CGCCTCCGCG AACCCCTCGC CGGACCACGA ACCCCGTTCG ACGGACTGCT GATCACCGGC
CAGGACGCCA CCGACGGCGA CACCGGGGGC GCGTTCTCCG CCGCCGAGGT CGACGCCGGG
CGGCGGCCGG CCTGCCAGAC CCTGCCGACC GGCGACCTCG TGGTCACCCG GTAG
|
|---|
| Protein sequence | MVTGSGMGGL AAARALAEFG DRRVLVLERH HVLGGMTHDY DVLHFPDPTS PRTRSASPRS
SAPSTSTSRP ASETPACARS SPPAPTSTAP PRTAPLQAEG GRSCLVLFLG FDRSPAEFGL
RGENHSFVDP PTADRWRDGK DAACGQFKRD TTRRVLDRMD ARWPGFSDAV AFAELATPLT
FETYQNSHRG VFYGLPATPD RLREPLAGPR TPFDGLLITG QDATDGDTGG AFSAAEVDAG
RRPACQTLPT GDLVVTR
|
|---|
| |