| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_2542 |
|---|
| Symbol | |
|---|
| ID | 8326731 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 2866515 |
|---|
| End bp | 2866982 |
|---|
| Gene Length | 468 bp |
|---|
| Protein Length | 155 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644943084 |
|---|
| Product | transcriptional regulator, AsnC family |
|---|
| Protein accession | YP_003100325 |
|---|
| Protein GI | 256376665 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1522] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.44011 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGACGAAC TTGATACGAA CATCCTGCGC GAATTGCAGG TCGACGCACG GCGGAGCAAC
CGGGACGTGG CCGCCGCCGT GGGCGTCGCC CCGACCACCG CGCTCGACCG CACCCGCGCC
CTCCGCGAGC GCGGCGTGAT CAAGGGCGCG ATCCTGGACG TCGACCTTCC CTCGATCGGG
CGACCCGTGC AGGCGCTGAT CGCGGTCCGC ATCCGGCCGC CGGCGCGCCG CGTCATCGAG
GAGTTCCGCG CCTGGGCCAT CGCCCAGCCG GACACCCTGG GCGTGTTCGT CACGTCGGGC
TCGGAGGACT TCCTGCTGCA CGTCGCCGTG CCCGACAACG ACCACCTCTA CCAGTTCGTG
GTGGACAAGC TCACCGAACG GTCCGAAGTC GCCGACGTGC GCACCTCCGT CGTGTACCAG
CACCTGCGCA ACGACCGGAT CAGCCCGGTC GGCAGACTGT CCCCATGA
|
|---|
| Protein sequence | MDELDTNILR ELQVDARRSN RDVAAAVGVA PTTALDRTRA LRERGVIKGA ILDVDLPSIG
RPVQALIAVR IRPPARRVIE EFRAWAIAQP DTLGVFVTSG SEDFLLHVAV PDNDHLYQFV
VDKLTERSEV ADVRTSVVYQ HLRNDRISPV GRLSP
|
|---|
| |