Gene Amir_2483 details

Gene Information

• Locus tag: Amir_2483
• ID: 8326672
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Actinosynnema mirum DSM 43827
• Kingdom: Bacteria
• Replicon accession: NC_013093
• Strand: +
• Start bp: 2766687
• End bp: 2768600
• Gene Length: 1914 bp
• Protein Length: 637 aa
• Translation table: 11
• GC content: 72%
• IMG OID: 644943028
• Product: hypothetical protein
• Protein accession: YP_003100269
• Protein GI: 256376609
• COG category: [R] General function prediction only
• COG ID: [COG3889] Predicted solute binding protein

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.00000855708
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCTCGCGC TCGCCTCGGG CGTCGCCGCG ACGCAGGTCC GCCCGGCGCT CGCCGAGCCG 
AGCGCGGTCG TCAACCCGGT GCGCACGGTC GACCCCTCCG ACGTCTACCG CGACCCGGCC 
CACGGCTTCA TCGTCCTCGT CGAGCAGGAC GCCAGCCTCC GCGAGAACGA GGTCGAGGGC 
CCGGTCGCGA TCGGCGGGAA CCTCAGCTTC CGCGACTTCC GCGCAGGCTC CAACCACCCC 
GGCGCCTACG TCCTCCCCGG TGACGCCCAA CCGACCAGCC TCGTCGTCGG TGGCCGCCTC 
GACTACGCCG CCAGCACCCC CACCGCCCGC TTCGACCTGC TCAACGCGTC CTACGCGAAG 
TTCGGCGACC TCTCCAACGC CACCGCCGTC GAGAACGTCA GCACCACCGA CATCGTCCCC 
GCAGGCCGCC CCGCCCCCGT CCTCCAGGTC CACACCCCCC AACCCGCGGC CTCGCTCACC 
CGCCCCTCGG GCTTCGACCT CCCCGCCCTC TTCACCACCT ACCGCAAGCT CAACGCGGGC 
ATGGCCGCCT GCCCGTCCAC CGCCGTCCTG CGCGACCAGA ACGGCCAGAA CCCGTGGAAC 
GGCGAGGACC CCACCGCGAC CCTCGGCCTG CGCCCAGGCC AGAACGTCCT CACCCTCACC 
CCCGACCAGC TCGACAAGCT GGCCACCCTC AACCCCCTCG CCAGCTACAA CCAACCCGGC 
GACGGAAGCG GCGCCTGGCT GATCGTGAAC GTGCCCTTCA CCGGCGACCG CGCGCTCCAC 
CTGCCGAACG TCACCTGGCA GGGCAACTCC GCGTCCAGGC ACGTCCTGTG GAACTTCACC 
ACCACCGGCA CCCTCACCCT CCCCCCGGAG ACCGGCACCC TCTGGGGAAC CCTGTACGCC 
CCGAACGCGC ACGTCCTCGA CCTGAGCCCC GGCAACGTCG AGGGCGACCT GATCGCCCGA 
ACCCTGACGA TGGGCGGCCC GGACTCCGGG AGCGGCGGCG AGGTCCACCA CGCGCCCTTC 
CAGGAGGTGG TCACCACCTG CGCGACCACC ACCGATGCGC CGTCGACCAC GACGGACCTG 
CCGTCGACCA CGACGGACCT GCCTGTCACC ACGGACGCTC CCACCACGAC GGACGCTCCC 
ACCACGGATC TGCCCGTCAC CAGCACCACG GACGTGCCTG CCCCGCAGCC CCCGACAACG 
GGTCAACCGC CTGCCGAACC GACCTCCACC ACAACCAGCA CGCCCCTGAG CACCTCGACC 
ACCGCGCCCA CCCCGACCAC CCCAACCACC CCGTCCGCCG CACCACCCGC CACAACCGAG 
CCGCCACCGT CGCCCACGAC CACCACCACC ACCACGTCAC CAACCACCAC CACCGGGCCT 
CCAACCACCA CAGGTCAAGC CCTCACCCCC ACCACCATCA CCACAACCGC CGCCCCGGTC 
CCCGCCCCCA CAACCACAGC CACCACCACG ACCAAGCACC TGATCCCCCC GAGAACCTCG 
TTCAAGGGCG GCCTCATCAC AGCTCCGGGC CTGATCGACC CGGTGACCAT CGACCCGATC 
GTCACCGACC CGCCCACCAC CGACCCCACA ACCACAGACC CCACAACCAC AGACCCCACA 
ACCACCACCA CCCAGCCGCC GACCTCCATC AGCGACCCGA CCCCACCCAC CACCTCACCC 
CCCACGACAA CCGGCAAGCC CCCGGCGAAC CCCATGGGCA CCCCGGACCC ACCCACCCCC 
ACCACGCCCG CGACCGCCGC CCCCGTCACT GCCGAACAAG CAACCGCACC CCCCACTCAC 
CCCCTGGCAG GCACAGGCTC CCCCGCAGCG ACACTCCTGG GCCTAGCCGC CACCCTCCTC 
ATCACAGGCG CGGCCCTGAC CGCCCTGGAC CGCACCAGAA CCCCCAAGCC CTAA 

 

Protein sequence

MLALASGVAA TQVRPALAEP SAVVNPVRTV DPSDVYRDPA HGFIVLVEQD ASLRENEVEG 
PVAIGGNLSF RDFRAGSNHP GAYVLPGDAQ PTSLVVGGRL DYAASTPTAR FDLLNASYAK 
FGDLSNATAV ENVSTTDIVP AGRPAPVLQV HTPQPAASLT RPSGFDLPAL FTTYRKLNAG 
MAACPSTAVL RDQNGQNPWN GEDPTATLGL RPGQNVLTLT PDQLDKLATL NPLASYNQPG 
DGSGAWLIVN VPFTGDRALH LPNVTWQGNS ASRHVLWNFT TTGTLTLPPE TGTLWGTLYA 
PNAHVLDLSP GNVEGDLIAR TLTMGGPDSG SGGEVHHAPF QEVVTTCATT TDAPSTTTDL 
PSTTTDLPVT TDAPTTTDAP TTDLPVTSTT DVPAPQPPTT GQPPAEPTST TTSTPLSTST 
TAPTPTTPTT PSAAPPATTE PPPSPTTTTT TTSPTTTTGP PTTTGQALTP TTITTTAAPV 
PAPTTTATTT TKHLIPPRTS FKGGLITAPG LIDPVTIDPI VTDPPTTDPT TTDPTTTDPT 
TTTTQPPTSI SDPTPPTTSP PTTTGKPPAN PMGTPDPPTP TTPATAAPVT AEQATAPPTH 
PLAGTGSPAA TLLGLAATLL ITGAALTALD RTRTPKP