| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_2435 |
|---|
| Symbol | |
|---|
| ID | 8326624 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 2702403 |
|---|
| End bp | 2703164 |
|---|
| Gene Length | 762 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 644942980 |
|---|
| Product | transcriptional regulator, DeoR family |
|---|
| Protein accession | YP_003100221 |
|---|
| Protein GI | 256376561 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0079946 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGGCAGC AGGACCGGTT TTCGCTCATT CTCGATCGGC TGAACCACAG CGGTTCGGTC
ACCGTGGGCG AGCTGTCCGG GGCGACCGGC GCGTCCGCCG CCTCGGTCCG GCGGGACCTG
CGGTCGCTGG AGGAGCAGCA GCTGCTCAAG CGCACGCACG GCGGCGCGGT GTCCACCGAG
GTGATCTACG AGCTGCCGCA GCGGTACCGG GCGGGGCGCG GGCAGCAGCA GAAGCGGCGG
ATCGCCGAGG CGGCGGCGGC GCTGGTGGAC GAGGACGTGC GGTCGGTGGG GCTGGGCGGC
GGCACGACCA CGACCGAGCT GGCCCGGCTG CTCGCGGCGG GCAAGCCGCT CAAAGTGGTC
ACCAACGCGC TCAACATCGC GAGCGACCTG TCGGTGCGGC CGTCGATCGA CCTGGTGGTG
ACCGGGGGCG GGGTGCGGCC GGACTCGTAC GACCTGGTGG GGCCGATCGC GGACCGGGCG
CTCGCGGGGA TCAGCGTGGA CGTGGTGTTC CTGGCGGCGG CGGGTGTGGA CTCGGTGCTG
GGGGTGAGCT CGTGCGACGA GATCGGGGCG AACACCGACC ACAGCCTGAT GGCGACCGGG
CGGCGGGTGG TGGTGCTGGC CGACCCGGAG GTGGTGGGGC GGCGGGCGTT CGCGCGGGTG
GCCCCGGTGA CGGCGGTGTC GGTGGTGGTC ACGGGGGCTG CGGCGGATCA GGAGGAGCTG
GCCCGGTTGC GGGCGGTGGG GGTGGCGGTG GTGATCGCGT GA
|
|---|
| Protein sequence | MRQQDRFSLI LDRLNHSGSV TVGELSGATG ASAASVRRDL RSLEEQQLLK RTHGGAVSTE
VIYELPQRYR AGRGQQQKRR IAEAAAALVD EDVRSVGLGG GTTTTELARL LAAGKPLKVV
TNALNIASDL SVRPSIDLVV TGGGVRPDSY DLVGPIADRA LAGISVDVVF LAAAGVDSVL
GVSSCDEIGA NTDHSLMATG RRVVVLADPE VVGRRAFARV APVTAVSVVV TGAAADQEEL
ARLRAVGVAV VIA
|
|---|
| |