Gene Amir_2354 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_2354 
Symbol 
ID8326543 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp2609457 
End bp2610617 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content67% 
IMG OID644942899 
Productflagellin domain protein 
Protein accessionYP_003100140 
Protein GI256376480 
COG category[N] Cell motility 
COG ID[COG1344] Flagellin and related hook-associated proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCTTC GCATCAACTC CAACATCGCG GCGATGAACG CCTACCGCAA CCTCTCGGTG 
AACGACAAGC AGATGGCCGG CAGCCTGGAG AAGCTGTCGT CCGGCCTGCG GATCAACCGG
GCGGCGGACG ACGCGGCGGG TCTGTCCATC AGCCAGGGCC TCACCTCTCA GATCGGTGGC
CTGAAGGTCG CTGCGCGCAA CGCGCAGGAC GGCGTCAACG TCGTCCAGAC CGCGGACGGC
GCCCTGAACG AGTCGGCTGA GATCCTGCAG CGCATGCGCG ACCTCGCTGT CCAGGCCTCC
AACGGTGGTT CCCAGGACAC GAACGCGCGT GCCGCCGCGC AGACCGAGTT CGGCCAGCTC
CAGAAGGAGC TCGACCGCAT CGCCAAGACC ACCTCCTTCG GTGGTCAGAA GCTGCTGGAC
ACGGCGGGCA CCGCTTACAA CGGCACCTTC CAGGTCGGCG CCAACAACAC CGCCGACGAC
CAGATCCAGG TCAACCTGGA CGCCACGGTC TTCGGCAGCT CCGGCGGCAC CAAGTCGAGC
TACACCGTGT CGGGCGGCAC GTACGACTCC GCCACCCTCG ACACGAAGAC GATCACCGCG
ACGCAGGGCG CCACGACCGC CACGGTCACG CTGGCCACGC CGGCTGACCT CGACGCCGTG
GTCTCCCAGT TGAACGCTGA CGCCACCTTC TCGGGCGGCT TCACCGCCAG CAAGGACGGC
GGTGAGCTGA AGATCGAGTC GAAGACCAAC GGCACGGGCG CGGTCACCCT CACGGGTACC
TCGGGCCTGA CCGGCGCCGG CACGAACGGC ACCGCCGGCG CGACCGGCTT CGACTCCGCG
GGCCTCGGCG TCGGTACCAC CGTCAAGGTG GACACCACCG CCAACGCCCA GTCCGCGATC
GACTCGATCG ACAGCGCCAT CAAGGGGCTG TCGACCGCGC GGGCCCAGCT CGGTGCGTAC
CAGAACCGGT TCGAGCACAC CATCAACAAC ATCAACGTCC AGGTGGAGAA CCTGTCCGCG
TCCAAGTCGA ACATCACCGA CACGGACATG GCGCAGGAGA TGGTCAAGTT CACCCGGTCG
CAGATCCTGT CGCAGGCTGG CACCGCCATG CTCGCGCAGG CCAACCAGGC GCCGCAGAAC
GTTCTGCAGC TCCTGAGGTG A
 
Protein sequence
MSLRINSNIA AMNAYRNLSV NDKQMAGSLE KLSSGLRINR AADDAAGLSI SQGLTSQIGG 
LKVAARNAQD GVNVVQTADG ALNESAEILQ RMRDLAVQAS NGGSQDTNAR AAAQTEFGQL
QKELDRIAKT TSFGGQKLLD TAGTAYNGTF QVGANNTADD QIQVNLDATV FGSSGGTKSS
YTVSGGTYDS ATLDTKTITA TQGATTATVT LATPADLDAV VSQLNADATF SGGFTASKDG
GELKIESKTN GTGAVTLTGT SGLTGAGTNG TAGATGFDSA GLGVGTTVKV DTTANAQSAI
DSIDSAIKGL STARAQLGAY QNRFEHTINN INVQVENLSA SKSNITDTDM AQEMVKFTRS
QILSQAGTAM LAQANQAPQN VLQLLR