| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_2342 |
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| Symbol | |
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| ID | 8326531 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 2599591 |
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| End bp | 2600574 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644942887 |
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| Product | Lytic transglycosylase catalytic |
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| Protein accession | YP_003100128 |
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| Protein GI | 256376468 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.920192 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCGCGG GCATCGCGGG CATCGGCGTG CGGATGCAGG AGATCAACCG GATGATCGTC
GGGTTGGTCC CCAAGGCGGC CGAGCCCGCC GCCACCTCGG GGACGGAGTT CGCGTCGGCG
CTGACCAGCG CCCTGTCCGG GACCACGGCG ACCTCCGGGG CGTCGACGTC GGGCGGGGTG
TCCGGCGGCC AGGTCGTGGA GAACGCGAAG CAGTACCTGG GCGTGCCGTA CGTGTGGGGC
GGCACCGACC CGGCGAAGGG CCTGGACTGC TCCGGGCTGG TGCAGCTGGT CTACAAGAAC
CTGGGCATCA CCCTGCCCCG CGTGGCCGAG GACCAGGCGC AGCAGGGCGC CGCCGTGCCG
AGCCTCGACC AGGCCAAGCC CGGTGACCTG GTGACGTTCG GCAACCCGGC CTACCACATC
GGCATCTACA CCGGCGACGG CAAGATGATC CACGCCCCCG AGCCGGGCGC GCAGGTGCGC
GAGCAGAAGA TCTGGGAGAC CCCGACCTCG ATCCGCCGGA TCGTGCCGGA GGCGAGCGCC
TCGGCGGTGT CGGCGAGCGG GTCGGCGGCC CGGCCCGCGG CGCTGTCCGG CGGGGCGGCG
ACCTACGAGA GCGCGTTCGC GGCGGCGACG GCCAAGTACG GCCTGCCGCA GGGCCTGCTG
TCGGCGGTGG CGTCGGTGGA GTCCAACTAC AACCCGACCG CCGTGAGCAG CGCGGGCGCG
CAGGGCCTGA TGCAGATCAT GCCCGCGACC GCCGCCGGGC TCGGCGTGAA CGCGCTCGAC
CCGATGCAGG CCATCGACGG CGCGGCCCGG CTGCTGTCGG GCAACCTCAA GTCCTTCAAC
GGCTCGCTGC CGCTGGCCAT CGCCGCGTAC AACGCGGGCT CGGGCGCGGT GCAGAAGTAC
GGCGGCATCC CGCCGTTCGC CGAGACCCAG AACTACGTCC CCAAGGTCCA GGCCGCGATG
GCCAGGCTGA ACGGCGGTGC CTAA
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| Protein sequence | MSAGIAGIGV RMQEINRMIV GLVPKAAEPA ATSGTEFASA LTSALSGTTA TSGASTSGGV
SGGQVVENAK QYLGVPYVWG GTDPAKGLDC SGLVQLVYKN LGITLPRVAE DQAQQGAAVP
SLDQAKPGDL VTFGNPAYHI GIYTGDGKMI HAPEPGAQVR EQKIWETPTS IRRIVPEASA
SAVSASGSAA RPAALSGGAA TYESAFAAAT AKYGLPQGLL SAVASVESNY NPTAVSSAGA
QGLMQIMPAT AAGLGVNALD PMQAIDGAAR LLSGNLKSFN GSLPLAIAAY NAGSGAVQKY
GGIPPFAETQ NYVPKVQAAM ARLNGGA
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