Gene Amir_2341 details

Gene Information

• Locus tag: Amir_2341
• ID: 8326530
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Actinosynnema mirum DSM 43827
• Kingdom: Bacteria
• Replicon accession: NC_013093
• Strand: -
• Start bp: 2597554
• End bp: 2599590
• Gene Length: 2037 bp
• Protein Length: 678 aa
• Translation table: 11
• GC content: 80%
• IMG OID: 644942886
• Product: flagellar hook-length control protein
• Protein accession: YP_003100127
• Protein GI: 256376467

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.559882
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAACGTGA CCGTGCAGGG CGCGGCGTCC ACCTCCTCGT CGGCGTCCGC GGCGGACGCC 
CGGCCGAGGG GCAGGACGGG GAGCGGTTTC GACGGCGTGC TCGCGCAGGC CGTCAGCGCG 
TCGACCGGGC GCGCGGCGCG GGACGAGGGC GACGAGACCG CCAAAGCGGG CTCGGACCGG 
GCCTCGGACA CCAGGGCGGA GGCCAGGGCG GGCGCCAGGC AGTCGGCGGG GGCCAAGGCC 
GCCGCCGGTG CGCGGGCGGC CGAGCGGGCC GAGGACGCGG ACGCGGACGC GGCTAAGGCC 
GGGGCGCGCG CCGAGGCCGC GGCGCTGGCC GCGCTGCTCG GCGCGCTGGG CGTGCAGCCG 
CAGGCCCTCC AGACTTCATC CGCGAGCGAT GGAAATGGCG AGAACACGGG GCGGGCCGCT 
CCGCTCCCCT ATGCGCTCGC CTCCGGCGGC GCACCCGACG AGGCCGGTGT CAGGCTGGCT 
GCCGGGCTGT CCGCGACGCA GGTGCTCGGC CGGGTGACCG CGCAGGCCCA GATCGCCGCG 
CAGCTCGCGG CGCAGGCCGG GATCGGGTTG TCGGCGCAGG CCGACCTCGC CGCGCAGGCG 
CTGTCGGCGC AGGTGTCCGC GCAGGTCGCG GGCCAGGCCG AGCTGACCGC CCAGGTCGCC 
GGTCAGGCGG GCGCGGGCGC CACCCAGGTG GTGTCGGCGG TCGCGGCCCA GGCCGCTCAG 
GTTTCCGCGC GGGCGACGGC GCAGCTGTCG TCCGACGCGG GCGCGCAGGT CTCCGCCGAG 
CTGTCCGCGC AGGTCGCGGT CGGCCCGGCG GGGCAGGCCG GGTCCGGTGC GGAGTCCCCC 
GCCGCACCGT CCCCGGACGC GCCGACCGTC CCCGGCCAGC AGGCCGCGTC CACCCCGTCC 
TCCCCCTCGG CGGGGCTGGT CGAGGCGGTG GCGCTGCTCA AGGCGCAGGG CGAGGTCGAC 
GCTGCGGTGG ACGCCGAGTC CGCGGCGCGG CTCGCCGCGC GGGCGGGCGC CGCCACCGGC 
CGGGTCCCGG CCGGTCAGGA CCCCGGCGCG GCGGCCCTCC CGCCCGCCGC GCCGGGGCAG 
GTCTCCGGCG TCCCCGCCCA GGCGGGCGCG CAGGTCGCCG CCCAGGTGGC CGCGCAGCTC 
GCGGCGGCGG ACACCCCGAC CGGCATCACC CCTCCGGGGG TCGCCCAGGT AGACGACAAG 
TCCGAGGCGC AGGTGAGCGG TGAGCCGAAG TTGTTCGGCG GACCGCGGGT CCACGGCAAG 
CCGGTGGCCG AGCACGTCGC CGAGGCCGCC GCCGAGGCCG ACCTCGCGGT GACCGCCCAG 
GTCGACGCGG GCGTCCAGGC GGCGCCCGCC ACCGCGGCGG CGGCGGCGGT CACCTCCCCG 
GTGGCCACCC AGGCCGCGGC GGCCTGGGCG GCCGTGCAGG GCGCCGCGCA GTCCACCCTC 
CAGGGTGTCG CCCGCACGGG CGACGCGGTG GAGGAGCGGG CGTCCGCCGA GGTGAAGCTG 
GACGGCGTCG CCGCCGCCGG TCACGCCTCG TTGGCCGCGC AGGCCCCGAC CGCGCCCACC 
ACCCAGGTGT CCGCACCGGC GCCCGCGCAG GCCCCGGCCG CGCCGCAGCC GGTCCCGCAG 
CTGCCGCCCA GCTCCCAGCT GGCGGCGGCG CTCGCCCCGC TGCGCGGGCG CAACGGCGTG 
CACGAGCTGA CCGTGCACCT GCACCCGCTG GACCTGGGTC CGATCGCGGT GACCGCGCAG 
GTCAACGGCG ACCAGATCCA GCTGACCCTC AGCGGCGCCA CCGAGACCGG GCGGGACGCG 
CTGCGCGCGG CGCTGCCCGA CCTGCGCCGG GAGATGGAGC GCGCCGGCTT CGGCACGACC 
TCCTTCACCG GCGGCCAGGA CGGCGGCGGC CAGCAGCGCG GGTCGTGGCA GTCCCCGGCC 
GAGCGCGGCT TCGGCCTGCG CCCGGCGATG ACCGCCTCGG CGTTCGGCAG CACCACCCAG 
ACCACCGCGA CCGGGGCGAC CACGCGCGCC ACCGGGTCGC TGGACCTGCG CGCCTGA 

 

Protein sequence

MNVTVQGAAS TSSSASAADA RPRGRTGSGF DGVLAQAVSA STGRAARDEG DETAKAGSDR 
ASDTRAEARA GARQSAGAKA AAGARAAERA EDADADAAKA GARAEAAALA ALLGALGVQP 
QALQTSSASD GNGENTGRAA PLPYALASGG APDEAGVRLA AGLSATQVLG RVTAQAQIAA 
QLAAQAGIGL SAQADLAAQA LSAQVSAQVA GQAELTAQVA GQAGAGATQV VSAVAAQAAQ 
VSARATAQLS SDAGAQVSAE LSAQVAVGPA GQAGSGAESP AAPSPDAPTV PGQQAASTPS 
SPSAGLVEAV ALLKAQGEVD AAVDAESAAR LAARAGAATG RVPAGQDPGA AALPPAAPGQ 
VSGVPAQAGA QVAAQVAAQL AAADTPTGIT PPGVAQVDDK SEAQVSGEPK LFGGPRVHGK 
PVAEHVAEAA AEADLAVTAQ VDAGVQAAPA TAAAAAVTSP VATQAAAAWA AVQGAAQSTL 
QGVARTGDAV EERASAEVKL DGVAAAGHAS LAAQAPTAPT TQVSAPAPAQ APAAPQPVPQ 
LPPSSQLAAA LAPLRGRNGV HELTVHLHPL DLGPIAVTAQ VNGDQIQLTL SGATETGRDA 
LRAALPDLRR EMERAGFGTT SFTGGQDGGG QQRGSWQSPA ERGFGLRPAM TASAFGSTTQ 
TTATGATTRA TGSLDLRA