Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_2266 |
Symbol | |
ID | 8326455 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 2513485 |
End bp | 2515038 |
Gene Length | 1554 bp |
Protein Length | 517 aa |
Translation table | 11 |
GC content | 78% |
IMG OID | 644942811 |
Product | Pyridoxal-dependent decarboxylase |
Protein accession | YP_003100052 |
Protein GI | 256376392 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.981708 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGACGACC GAGGACGCCC CGAGGACCCC GCACCGGCCC TGAGCAGGGA AAACCTAGCC GGGCAGAACC CGTCCGGGCA GGACCCGGCC AGGCAGGCAC CGCCCCGGCA GGACCTGGAC GCCGCCGGTC GTGGCCCGGT CGACAACGCC GCCGCCGCGC TGGAGCTGGT GGCGCGCGCG GCGGGCCCGT TCCTGGCCGG CCTGCAGGAC CGCCCGGTGC ACCCGCCGGA CCGCGACCGC CTGCTCGACG AGCTGGCCGG CCCGCTCCCC GAGGACGGCG ACGGCGCGCT CGTCGCGGTC GCCGAGCTGC TCCGCGTGGG CACCGCCGCC GCGACGGCCA CCGCGGGCCC CAGGTACTTC GGCTACGTCG TCGGCGGCGC CACCCCCGCC GCGCAGGCCG GGGACTGGGT CGTCTCGCTG CTCGACCAGC CCACCGGCCT GTGGCCGACC TCGCCGCTGG CCGCGAAGGC CGAGACCGTC GTGCTGGGCT GGTTGAAGGA CCTGCTCGGG TTCCCCGCCT CGCACGGCGG CGTGCTCACC CCGAGCGCGA CGTTCGCGAA CCTGACCGGT CTGGCCTGCG CGCGGCACTG GTGGGCGGCC CGGCACGGGG TGGACGTGGC CGCCGACGGG CTGGCCGGGC TGCCGAGGAT GCCGGTGCTC TCCAGCGGCT ACGCGCACGC GAGCTGCCGC AAGGCCCTGC AGGTGCTCGG CTGCGGCCGG GACGGCCTGC GGCTGGTGGC CGAAGCGGAC GGGAGCCTGG ACGTCGACCG GCTGGACCGG GAGCTGGCCG ACTCGGGACC GGCGGTGCTG ATCGGCACGG CGGGCGAGGT CGACGCCGGC CGGTACGACC CGCTCGACGA GCTGGCGGAC CTCGCGGAGC GGCACGGGGC GTGGCTGCAC GTGGACGGCG CGTTCGGCCT GTTCGCCGCC GCCTCGCCGC GCACGCGGGG GCTGGTGCGC GGGGTCGAGC GGGCGGACTC GGTCGCGGCG GACTGCCACA AGTGGCTGAA CACCCCGTAC GAGAGCGGGT TCGCGCTGGT GCGCGACCGG AGCGCGCTGG CGCGGGCGTT CGGCTCGTGG AACGCGGCCT ACCTGCCGGA ACCGGACGAC GAGCGGATCA GCTACAACAC GCTGGGCCCG GAGTCCTCGC GCCGCGCGCG GGCGCTGCCG CTGTGGGCGG CGCTGCGCGC CTACGGGCGG GCGGGGCACC GGGCGCTGGT GGAGCGGCAC CTGGGGCTGG CGCGGCGGCT CGGCGAGCTG GTGGAGGCGG CGGACGACCT GGAGCTGCTG TCGCCGGTGA CGCTGTTCGT CGTCTGCTTC CGGTACCGGC CCGCCGGGAT GGCCGACCCG GCCGGGCTGG ACGCGCTGAA CCGGTCGCTG GGGGCGGCGC TGGCCGAGGA CGGCCGGGTG CACGCGGGCA CGACGTCGCA CCGGGGCGTG GTGGCGCTGC GACCGGCGAT CGTGAACTGG CGGACCCGGC CGGAGGACGT GGAGCTGCTG GTGGCGGTGG TGCGGGAGCT CGGGGCGCGG GTGCGCTCAG CCCTGGAGGG CTGA
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Protein sequence | MDDRGRPEDP APALSRENLA GQNPSGQDPA RQAPPRQDLD AAGRGPVDNA AAALELVARA AGPFLAGLQD RPVHPPDRDR LLDELAGPLP EDGDGALVAV AELLRVGTAA ATATAGPRYF GYVVGGATPA AQAGDWVVSL LDQPTGLWPT SPLAAKAETV VLGWLKDLLG FPASHGGVLT PSATFANLTG LACARHWWAA RHGVDVAADG LAGLPRMPVL SSGYAHASCR KALQVLGCGR DGLRLVAEAD GSLDVDRLDR ELADSGPAVL IGTAGEVDAG RYDPLDELAD LAERHGAWLH VDGAFGLFAA ASPRTRGLVR GVERADSVAA DCHKWLNTPY ESGFALVRDR SALARAFGSW NAAYLPEPDD ERISYNTLGP ESSRRARALP LWAALRAYGR AGHRALVERH LGLARRLGEL VEAADDLELL SPVTLFVVCF RYRPAGMADP AGLDALNRSL GAALAEDGRV HAGTTSHRGV VALRPAIVNW RTRPEDVELL VAVVRELGAR VRSALEG
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