Gene Amir_2266 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_2266 
Symbol 
ID8326455 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp2513485 
End bp2515038 
Gene Length1554 bp 
Protein Length517 aa 
Translation table11 
GC content78% 
IMG OID644942811 
ProductPyridoxal-dependent decarboxylase 
Protein accessionYP_003100052 
Protein GI256376392 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0076] Glutamate decarboxylase and related PLP-dependent proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.981708 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGACGACC GAGGACGCCC CGAGGACCCC GCACCGGCCC TGAGCAGGGA AAACCTAGCC 
GGGCAGAACC CGTCCGGGCA GGACCCGGCC AGGCAGGCAC CGCCCCGGCA GGACCTGGAC
GCCGCCGGTC GTGGCCCGGT CGACAACGCC GCCGCCGCGC TGGAGCTGGT GGCGCGCGCG
GCGGGCCCGT TCCTGGCCGG CCTGCAGGAC CGCCCGGTGC ACCCGCCGGA CCGCGACCGC
CTGCTCGACG AGCTGGCCGG CCCGCTCCCC GAGGACGGCG ACGGCGCGCT CGTCGCGGTC
GCCGAGCTGC TCCGCGTGGG CACCGCCGCC GCGACGGCCA CCGCGGGCCC CAGGTACTTC
GGCTACGTCG TCGGCGGCGC CACCCCCGCC GCGCAGGCCG GGGACTGGGT CGTCTCGCTG
CTCGACCAGC CCACCGGCCT GTGGCCGACC TCGCCGCTGG CCGCGAAGGC CGAGACCGTC
GTGCTGGGCT GGTTGAAGGA CCTGCTCGGG TTCCCCGCCT CGCACGGCGG CGTGCTCACC
CCGAGCGCGA CGTTCGCGAA CCTGACCGGT CTGGCCTGCG CGCGGCACTG GTGGGCGGCC
CGGCACGGGG TGGACGTGGC CGCCGACGGG CTGGCCGGGC TGCCGAGGAT GCCGGTGCTC
TCCAGCGGCT ACGCGCACGC GAGCTGCCGC AAGGCCCTGC AGGTGCTCGG CTGCGGCCGG
GACGGCCTGC GGCTGGTGGC CGAAGCGGAC GGGAGCCTGG ACGTCGACCG GCTGGACCGG
GAGCTGGCCG ACTCGGGACC GGCGGTGCTG ATCGGCACGG CGGGCGAGGT CGACGCCGGC
CGGTACGACC CGCTCGACGA GCTGGCGGAC CTCGCGGAGC GGCACGGGGC GTGGCTGCAC
GTGGACGGCG CGTTCGGCCT GTTCGCCGCC GCCTCGCCGC GCACGCGGGG GCTGGTGCGC
GGGGTCGAGC GGGCGGACTC GGTCGCGGCG GACTGCCACA AGTGGCTGAA CACCCCGTAC
GAGAGCGGGT TCGCGCTGGT GCGCGACCGG AGCGCGCTGG CGCGGGCGTT CGGCTCGTGG
AACGCGGCCT ACCTGCCGGA ACCGGACGAC GAGCGGATCA GCTACAACAC GCTGGGCCCG
GAGTCCTCGC GCCGCGCGCG GGCGCTGCCG CTGTGGGCGG CGCTGCGCGC CTACGGGCGG
GCGGGGCACC GGGCGCTGGT GGAGCGGCAC CTGGGGCTGG CGCGGCGGCT CGGCGAGCTG
GTGGAGGCGG CGGACGACCT GGAGCTGCTG TCGCCGGTGA CGCTGTTCGT CGTCTGCTTC
CGGTACCGGC CCGCCGGGAT GGCCGACCCG GCCGGGCTGG ACGCGCTGAA CCGGTCGCTG
GGGGCGGCGC TGGCCGAGGA CGGCCGGGTG CACGCGGGCA CGACGTCGCA CCGGGGCGTG
GTGGCGCTGC GACCGGCGAT CGTGAACTGG CGGACCCGGC CGGAGGACGT GGAGCTGCTG
GTGGCGGTGG TGCGGGAGCT CGGGGCGCGG GTGCGCTCAG CCCTGGAGGG CTGA
 
Protein sequence
MDDRGRPEDP APALSRENLA GQNPSGQDPA RQAPPRQDLD AAGRGPVDNA AAALELVARA 
AGPFLAGLQD RPVHPPDRDR LLDELAGPLP EDGDGALVAV AELLRVGTAA ATATAGPRYF
GYVVGGATPA AQAGDWVVSL LDQPTGLWPT SPLAAKAETV VLGWLKDLLG FPASHGGVLT
PSATFANLTG LACARHWWAA RHGVDVAADG LAGLPRMPVL SSGYAHASCR KALQVLGCGR
DGLRLVAEAD GSLDVDRLDR ELADSGPAVL IGTAGEVDAG RYDPLDELAD LAERHGAWLH
VDGAFGLFAA ASPRTRGLVR GVERADSVAA DCHKWLNTPY ESGFALVRDR SALARAFGSW
NAAYLPEPDD ERISYNTLGP ESSRRARALP LWAALRAYGR AGHRALVERH LGLARRLGEL
VEAADDLELL SPVTLFVVCF RYRPAGMADP AGLDALNRSL GAALAEDGRV HAGTTSHRGV
VALRPAIVNW RTRPEDVELL VAVVRELGAR VRSALEG