Gene Amir_2257 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_2257 
Symbol 
ID8326446 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp2500259 
End bp2501308 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content71% 
IMG OID644942802 
Product5'-3' exonuclease 
Protein accessionYP_003100043 
Protein GI256376383 
COG category[L] Replication, recombination and repair 
COG ID[COG0258] 5'-3' exonuclease (including N-terminal domain of PolI) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones3 
Plasmid unclonability p-value0.00000970599 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGGAAGCC TAGTCGCCCC CGCCCACTCC GCCCGCCCCA CGACGATCAC CCCCACCGCG 
CCGCCCCGCC CCCTGTCGGT GCTCTCTGGC AAGCTCACCC CGGTGAGCAG CCCGCTCGTC 
CTGATGGACG CCGCCAGCCT GTACTTCCGG TCGTTCTACG CGCTCCCGGA GTCGATGACC 
GCACCGGACG GCACCCCGGT CAACGCGGTG CGCGGTTTCG TCGACACCAT CGCCAAGATC 
GTCAACGACC GGAACGCCTC CAGGCTCGTG GCCTGCCTCG ACGCCGACTG GCGCCCGGAG 
TTCCGAGTGG CCGCGCTGCC CTCCTACAAG GCCCACCGCG TGGCGGAGAG CGGCGACGCC 
GAGGAGGTCC CCGACACCCT CACCCCCCAG GTCCCGATCA TCCTGGACGT CCTCGACGCG 
GTGGGCATCG CCACCGCAGA GGCCCCCGGC TACGAGGCCG ACGACGTCAT CGGCACCCTC 
GCAGCCCGCG AGACCACCAA CCCCGTCGAG GTCGTCACCG GCGACCGAGA CCTCTTCCAG 
GTGGTCCGCA CCACCCCAAC CCCCGCAGGC GTCCTCTACC TGGGCCGAGG CTGGGCGAAG 
GCGGAACTGG TGGGCCCGGC AGAACTGGCC GCCAAGTACG CCCTCCCCGA AGAAGACGCA 
GGCCGCGCCT ACGCCGGAAT GGCAGTCCTG CGCGGCGACC CCTCGGACGG CCTCCCCGGC 
GTGGCAGGCA TCGGCGAGAA GACCGCAGCA AAGCTCATCA CCGAGTTCGG CTCCCTGGAA 
GCCCTCCTGG CAGCAGTCCA CGACGGCAGG GACCGCAAGC TCACCACCAA GGCCCGCAAC 
GCCCTGATCG CAGCAGAGGA CTACCTGGCC GTAGCCCCCA CCGTGGTCAA CGTGGCCCTG 
GACGCCCCAG TGACCCAAGA CCGCGACGAC ACCCTCCCCA CAACCCCAGC AGACCCGGCC 
CGCCTGACGG AACTGACGAA GCGCTGGGGC CTGGGCAGCT CAATCCCCCG CCTGGTCACC 
GCCCTGGAAC GCCGCGCAGA ACGAACCTGA
 
Protein sequence
MGSLVAPAHS ARPTTITPTA PPRPLSVLSG KLTPVSSPLV LMDAASLYFR SFYALPESMT 
APDGTPVNAV RGFVDTIAKI VNDRNASRLV ACLDADWRPE FRVAALPSYK AHRVAESGDA 
EEVPDTLTPQ VPIILDVLDA VGIATAEAPG YEADDVIGTL AARETTNPVE VVTGDRDLFQ 
VVRTTPTPAG VLYLGRGWAK AELVGPAELA AKYALPEEDA GRAYAGMAVL RGDPSDGLPG 
VAGIGEKTAA KLITEFGSLE ALLAAVHDGR DRKLTTKARN ALIAAEDYLA VAPTVVNVAL 
DAPVTQDRDD TLPTTPADPA RLTELTKRWG LGSSIPRLVT ALERRAERT