| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_2254 |
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| Symbol | |
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| ID | 8326443 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 2494410 |
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| End bp | 2497400 |
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| Gene Length | 2991 bp |
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| Protein Length | 996 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644942799 |
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| Product | DEAD/DEAH box helicase domain protein |
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| Protein accession | YP_003100040 |
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| Protein GI | 256376380 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4581] Superfamily II RNA helicase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.462314 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCAAGTG CTTCCCGGTC CCCGGCCGAG GCCTATGCGG AATCCCGCCG CCGCGCTTCC
CGGCCCCAGT TGACCGACTT CCTCTCGGTG GTCTCCTTCG AGCTCGACCC GTTCCAGCTG
CGCGCCTGCG AGTTCCTGGA GGACGGCCAC GGCGTCCTGG TGTGCGCGCC GACCGGCGCG
GGCAAGACCG TCGTCGGCGA GTTCGCCGTG CACCTCGCCC TCGCCGAGGG TCGGAAGTGC
TTCTACACCA CGCCGATCAA GGCGCTGTCG AACCAGAAGT ACGCCGACCT GTGCGCCCGG
TACGGCCAGG ACAAGGTCGG CCTGCTCACC GGCGACACCT CGGTCAACGG CGACGCCCCC
GTGGTCGTCA TGACCACCGA GGTGCTGCGG AACATGCTCT ACGCGGGCTC CTCCACCCTC
AACAGCCTCG GCTACGTGGT CATGGACGAG GTGCACTACC TCGCCGACCG CTTCCGGGGC
CCGGTGTGGG AGGAGGTCAT CCTGCACCTG CCCGAATCGG TGCGGCTGGT GGGCCTCTCG
GCCACGGTGA GCAACGCCGA GGAGTTCGGC GAGTGGCTCG TCACCGTCCG AGGTGACACC
GCGGTGGTGG TGGACGAGCA CCGACCGGTG CCGCTGTGGC AGCACATGCT GGCCGGCCCG
CGCATGTTCG ACCTGTTCGC CGACGACGTC GCCGACACCC ACGTCAAGAT CAACCCGCAG
CTGCTGCGCC AGGTCGAGGA CCTGGCCCGC TTCCACGTGC CGTGGACGCG CGGCCGGGGC
AACAAGGGCG GCCGTCCGCC GCGCTCGACC GGGTTCAAGC CGCCGTCGCG GGTCGACGTC
GTCCAGCGGC TCGACGCGGC CGGGCTGCTG CCCGCGATCG TGTTCGTGTT CAGCCGGGCG
GGCTGCGACG CGGCCGTCAA CCAGTGCGTG CGGTACGGCC TGCGCCTGAC CACGCCCGAC
GAGGTCGAGG TCATCCGCCG GATCGTCGAC GAGAAGACCC GCGACCTGCC GCAGGACGAC
CTGACGGTCC TCGGCTACTG GGAGTGGCGC GAGGCGCTGG AGCGCGGCAT CGCCAGCCAC
CACGCCGGCC TGCTGCCCGC GTTCAAGGAG ACGGTGGAGG AGCTGTTCGT GCGCGGCCTG
GTCAAGGCCG TGTTCGCCAC CGAGACCCTC GCGCTCGGCA TCAACATGCC CGCGCGGACG
GTGGTGCTGG AGAAGCTGGT CAAGTACAAC GGCGAGGCGC ACGTCGACCT CACGCCGGGC
GAGTACACGC AGCTCACCGG GCGTGCGGGG CGTCGTGGCA TCGACGTCGA GGGGCACGCC
GTGGTGGTGT GGCAGCCCGG CGTCGACCCG AAGGCGGTCG GCGGGCTGGC GTCCACCCGC
ACCTACCCGC TGCGATCCTC GTTCCGGCCC GGCTACAACA TGGCCGTCAA CCTGGTGCAC
CGGCTCGGCG CGCCCGCCGC GCGCGACCTG CTGGAGCAGT CGTTCGCCCA GTTCCAGGCC
GACCGGTCGG TGGTGGGGCT GGCCAGGCGG ATCGAGCGCA ACCGGGAGGC GCTGGCGGGG
TACGCGGAGT CGATGACCTG CCACCTCGGG GACTTCGCGG AGTACGCGTC GCTGCGCCGC
CGGGTCTCGG AGCGGGAGAA GGCGCTGGCC AGGCAGAACA CCTCGGCCAG TCGCGCGGAG
ACCGCCGCGT CGCTGGAGAA GCTGCGGAAG GGCGACGTCA TCGCGGTGCC GTCCGGGCGG
CGGACCGGGT TGGCGGTGGT GATCGACCCA GGGCTGGAGC CGCTGGGGGA GCCGAGGCCG
TTCGTGGTCA CCGAGGACCG GTGGGCCGGG CGGTTGACCT CGACGGACTT CCCGGTCCCG
GTCGAGGTGC TGGGGAAGGT GCGGCTGCCC AAGCAGGTCG ACACCCGGTC GCCCAGGTCG
CGGCGGGACC TGGCGGCGAC GCTGCGCAAC ACCGGGATCG TCGCGCCGAG CGCGCGGAAG
CGGCGGTCCA CGGCGGACGA CGACGCCGAG CTGGCGACGT TGCGGCGGGC GCTGCGGGCG
CACCCGTGCC ACGGGTGCGA GAAGCGCGAG GAGCACGCTC GGTGGGGGGA GAGGTACCAC
CGGCTGCTGG CCGAGACGGA GCAGACGGAG CGGAAGGTCG CGGCCACGAC GCACTCGTTG
GCTCGGGAGT TCGACCGGAT CCGGGCGTTG TTGCGGGAGC GCGGGTACCT GGAGGTCGTG
GAGGACGAGC CCGAGGGTGG GGCCGTGTTC GAGGCTTCCA GTGAGGGCGT CGTTTCCGAG
GGGGCGGCTT CCGAGAGGGC TGCTTCCGAG AGGGCTGCTT CCGAGGGGGC TGCTTCCGAG
GGGGCGGCTT CTGCGGGCGT TGCTTCGGAG GGCGTCGGTG CGGGCGAGCC GGAGCAGAGG
AAGCGGCGGG TCGTGCGGCG GGCGGGGCAG GAGCGCGTGT CGGGCGGGCC CGGTAGGAGG
GGCGGGGAGC GGGTCACCGA GCACGGCAGG CGGTTGACCA GGCTCTACAG CGAGTCGGAT
CTGCTGGCTG CGGAGTGCCT GAGGCACGGG GTGTGGAAGG GGCTGGCGCC GGAGGAGCTG
GCGGCGGTGG TGTCGTCGCT GGTGTACGAG GCGCGCAGGG ACGGGCCGAT GGAGGCGCGG
CTGCCCGCGG GGAAGGTCTC GGACGCGATG ACCGCGACCG CGAGGTTGTG GGCTGAGCTG
GAGGACGACG AGCGCAGGCA CCGGCTCGAC CGCACCCGGC AGCCCGACCC CGGCTTCGCC
TGGGCGGTGT ACCGGTGGGC GCGCGGCGAG TCGCTGGAGC GGGTGCTCGG GACCACCGAC
ACGGGTGGGA CCGAGCTGGG GGCCGGTGAC TTCGTGCGCT GGTGCAGGCA GGTCGTCGAC
TTCCTCGACC AGATCAGGGA CGTCGTCGGC GGCGGCGACC CGGTGGGCGC GGCGGCCCGC
AAGGCGGTCG ACGCGCTGCG TCGTGGTGTG GTCGCGTTGG CCACGGTCTG A
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| Protein sequence | MSSASRSPAE AYAESRRRAS RPQLTDFLSV VSFELDPFQL RACEFLEDGH GVLVCAPTGA
GKTVVGEFAV HLALAEGRKC FYTTPIKALS NQKYADLCAR YGQDKVGLLT GDTSVNGDAP
VVVMTTEVLR NMLYAGSSTL NSLGYVVMDE VHYLADRFRG PVWEEVILHL PESVRLVGLS
ATVSNAEEFG EWLVTVRGDT AVVVDEHRPV PLWQHMLAGP RMFDLFADDV ADTHVKINPQ
LLRQVEDLAR FHVPWTRGRG NKGGRPPRST GFKPPSRVDV VQRLDAAGLL PAIVFVFSRA
GCDAAVNQCV RYGLRLTTPD EVEVIRRIVD EKTRDLPQDD LTVLGYWEWR EALERGIASH
HAGLLPAFKE TVEELFVRGL VKAVFATETL ALGINMPART VVLEKLVKYN GEAHVDLTPG
EYTQLTGRAG RRGIDVEGHA VVVWQPGVDP KAVGGLASTR TYPLRSSFRP GYNMAVNLVH
RLGAPAARDL LEQSFAQFQA DRSVVGLARR IERNREALAG YAESMTCHLG DFAEYASLRR
RVSEREKALA RQNTSASRAE TAASLEKLRK GDVIAVPSGR RTGLAVVIDP GLEPLGEPRP
FVVTEDRWAG RLTSTDFPVP VEVLGKVRLP KQVDTRSPRS RRDLAATLRN TGIVAPSARK
RRSTADDDAE LATLRRALRA HPCHGCEKRE EHARWGERYH RLLAETEQTE RKVAATTHSL
AREFDRIRAL LRERGYLEVV EDEPEGGAVF EASSEGVVSE GAASERAASE RAASEGAASE
GAASAGVASE GVGAGEPEQR KRRVVRRAGQ ERVSGGPGRR GGERVTEHGR RLTRLYSESD
LLAAECLRHG VWKGLAPEEL AAVVSSLVYE ARRDGPMEAR LPAGKVSDAM TATARLWAEL
EDDERRHRLD RTRQPDPGFA WAVYRWARGE SLERVLGTTD TGGTELGAGD FVRWCRQVVD
FLDQIRDVVG GGDPVGAAAR KAVDALRRGV VALATV
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