Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_2237 |
Symbol | |
ID | 8326426 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 2473356 |
End bp | 2473865 |
Gene Length | 510 bp |
Protein Length | 169 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 644942782 |
Product | NUDIX hydrolase |
Protein accession | YP_003100023 |
Protein GI | 256376363 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1443] Isopentenyldiphosphate isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0632516 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGAGCTGG TGGCGCTGGT TGATCCGGAT GGGGCAGTGG TGGGGCGGGC CTCGCGGGAG CGAGTGCGCG CCGAGGGGCT GTGGCACTCG TGCGCGGCGA TCGTGGTGCT GTCGGGGGAC GGCGAGCGGG TGTACGTGCA CCGGCGGACC GACACCAAGG ACGTGTACCC CGGCCTGTGC GACCCGACGT GCGGCGGGGT GGTCGCGGAC GGGGAGTCGC CGGAGGAGTG CGCCCGTCGG GAGCTGCGGG AGGAGCTGGG GGTGGTGGCG CCGGTGGAGT TCTCCTACCG GGCGCCGTTC GAGGACGGGA GCATCCGGTA CGTCGCGCAC GTCTACCTGG CGCGGTCCGA CGGGCCGTTC ACCCACCAGC CCGAGGAGGT GGCCTGGGGC GGGTGGGTGC CGCTCGCTCG GGTCCGCGAG CTGGTGGAGG ACCCGGAGTG GGCGGTGGCG CCGGACGGGC GGGCGCTCGT GCGGCGGTTG TTCTCGTCCG GAGGCGGGCT GTGGGGTTAG
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Protein sequence | MELVALVDPD GAVVGRASRE RVRAEGLWHS CAAIVVLSGD GERVYVHRRT DTKDVYPGLC DPTCGGVVAD GESPEECARR ELREELGVVA PVEFSYRAPF EDGSIRYVAH VYLARSDGPF THQPEEVAWG GWVPLARVRE LVEDPEWAVA PDGRALVRRL FSSGGGLWG
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