Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_2234 |
Symbol | |
ID | 8326423 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 2470663 |
End bp | 2471577 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 644942779 |
Product | ABC transporter related |
Protein accession | YP_003100020 |
Protein GI | 256376360 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.18079 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCGGTGA TCGAAGTGCG TGAGCTGACC AAGCGCTACG GCGCGACGAG AGCGGTCGAC GGCCTGAGCT TCACCGTGCC GCCCGGCCTG GTGACCGGGT TCCTCGGCCC GAACGGCGCG GGCAAGTCCA CCACCATGCG CGTGGTGCTG GGCCTGGACC GCCCCACGTC CGGGGAGGCG CTCGTCGGCG GCCACCGGTA CGCCGACCTG CCCCGGCCGC TGCACCGGGT GGGCGCGCTG CTCGACGCCG GTGACGCCCA CCCCGGCCGC GCGGCCCGCG ACCACCTGCG CGTGCTGGCC AGGAGCAACG GCATCGGCGA CCGCAGGGTG GACGAGCTGC TGGAGCGGGT GGGGCTCGGT TCGGTGGCGG GCAGGCGGGT GGGCGCGCTG TCGCTGGGGA TGCGGCAGCG GCTCGGCGTC GCGGCGGCGC TGCTCGGGGA CCCGGAGGTG CTGCTGTTCG ACGAGCCGGT GAACGGGCTC GACCCGGAGG GCATCCGCTG GATCCGGGGG CTGATGCGGG GCTTGGCGGC GGAGGGGAGG GCGGTGCTGG TGTCGAGCCA CCTGATGGGC GAGATGGCGC TGACCGCCGA CCGGGTGGTC GTGGTCGGGC GGGGCAGGCT GGTGCTGGAG GGACCGGTGT CGGAGCTGGT GGACCGGGCG CGGCGCGAGG TGCTGGTGCG CGCCCCGGAG CCCGGTGGGC TGGTGGCGGC GCTGGAGCGG GCCGGGGGAG AGGTCGTGCC GGAGGGGGAG CGGTGGGTGG TGCGCGGGCT GGACGCGCCC GCCGTCGCCG GGATCGCGCA CGCCGAGGGG GTGCTGCTGC ACGAGCTGAC GCCGCGCGGC GCGTCCCTGG AGGAGGCGTA CCTGGAGCTG ACCGAGTCCG TGGTGCGGCA CCGCGCCGAG GGGGTGGCGG CGTGA
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Protein sequence | MPVIEVRELT KRYGATRAVD GLSFTVPPGL VTGFLGPNGA GKSTTMRVVL GLDRPTSGEA LVGGHRYADL PRPLHRVGAL LDAGDAHPGR AARDHLRVLA RSNGIGDRRV DELLERVGLG SVAGRRVGAL SLGMRQRLGV AAALLGDPEV LLFDEPVNGL DPEGIRWIRG LMRGLAAEGR AVLVSSHLMG EMALTADRVV VVGRGRLVLE GPVSELVDRA RREVLVRAPE PGGLVAALER AGGEVVPEGE RWVVRGLDAP AVAGIAHAEG VLLHELTPRG ASLEEAYLEL TESVVRHRAE GVAA
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