Gene Amir_2207 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_2207 
Symbol 
ID8326396 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp2442742 
End bp2443476 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content72% 
IMG OID644942754 
Producttwo component transcriptional regulator, winged helix family 
Protein accessionYP_003099995 
Protein GI256376335 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAACGGGC AGGCGCTCGC CGCCCCGGCC ACACTGTGCG GCGTGAGCAC CTCGAAGGTC 
CTGGTTGTCG AGGACACCCA GGAGATCCGG ACCGTGATCG AGATGGCCCT GACCGACGCG
AGGTTCGACG TCCGCAGCGC GGGCGACGGC GACACCGCGC TGGAGCTGGT CCGCCAGTGG
GACCCGGAGG TCGTGCTGCT CGACCTCAAC ATCCCCGGCC CCGACGGCCT GGAGGTCTGC
CGCAGGCTGC GCCAGTTCTC CACCGCCTAC GTGCTGATGC TGACCGCCCG CGCGGACGAG
GTCGACAAGC TCGTCGGCCT GTCCGCCGGA GCCGACGACT ACCTCACCAA GCCCTTCTCC
CCCAGGGAGC TGGTGGCCCG CGTGCACACC GTGCTGCGCC GCCCCCGCAT CCCCGCCGCC
CGCGACAGCA GGCGCGTCGT GGGCCCCGTC GAGGTCGACC TGGACGCCAG GTCCGTCGAG
GTCAACGGCA ACCACGTGGC CACCACGAAG ATCGAGTTCG AGCTGCTGGC CGCGATCACC
GAGAACACCC GGCAGGTCCG CACCCGCGAC CAGCTGCGCA GGCGCGCCTG GGGCGAGGAG
TGGCTGGCCG ACGACCACGC GGTGGACGTC CACGTGTCGA ACCTGCGCCG CAAGCTCGTG
GCCGCCGGGG CGCCGCGCGA CTTCATCGCC ACCGTCCGCG GTGTCGGCTA CCGCGTCAAC
CAGGAGGTCC GATGA
 
Protein sequence
MNGQALAAPA TLCGVSTSKV LVVEDTQEIR TVIEMALTDA RFDVRSAGDG DTALELVRQW 
DPEVVLLDLN IPGPDGLEVC RRLRQFSTAY VLMLTARADE VDKLVGLSAG ADDYLTKPFS
PRELVARVHT VLRRPRIPAA RDSRRVVGPV EVDLDARSVE VNGNHVATTK IEFELLAAIT
ENTRQVRTRD QLRRRAWGEE WLADDHAVDV HVSNLRRKLV AAGAPRDFIA TVRGVGYRVN
QEVR