Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_2151 |
Symbol | |
ID | 8326340 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 2375993 |
End bp | 2376646 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644942701 |
Product | two component transcriptional regulator, winged helix family |
Protein accession | YP_003099942 |
Protein GI | 256376282 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000920449 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGCGCGTGC TGCTCGTGGA GGACGACGAC GGCGTCGCCG ACGCCCTCGT GGAGGCGTTG CGCGACCACG GCCACCGGGT GCTCCGGGTC AGCCGGGGAA CCGACGCCCT GTTGTCCCAC CGGGACCACG ACCTGGTCCT CCTGGACCTG GGCCTGCCGG ACGTGGACGG CCTGGACGTG CTGCGCAAGC TGCGCCTGGT GGCCTCCTCC CCCGTGCTCG TGCTGACCGC GCGCGGTGAC GAGCGGTCCG TCGTCCGGGG CCTGCGCCTG GGCGCCGACG ACTACCTCGT CAAACCCGTC CGCCTCGGCG AGCTCCTGGC CCGCATGGAC GCGGTGGCGA GGCGCACAGC CGTGACGAGC ACGACAGAGC ACGTGCACGT CTCCGACGTC GAGATCGACC TCCCCGGCAG GCGCGTGCTG GTCGCGGGCG CCGAGGCGAA GCTCACCGCC AAGGAGTTCG CGATCCTCGC CGCGCTCGCC AGCCGCGCGG GCACCGCCGT CAGCAGGCAG CAGCTCATGG ACGAGGTCTG GGGCGACGCC TACCTCGCGG TCTCCCGCTC CCTGGACGTG CACCTGGCCA GCCTCCGCGT CAAGCTGGCC CGCCCCGGCC TGATCACCAC GATCCGGGGC TTCGGCTACC GGTTGGGCGG CTGA
|
Protein sequence | MRVLLVEDDD GVADALVEAL RDHGHRVLRV SRGTDALLSH RDHDLVLLDL GLPDVDGLDV LRKLRLVASS PVLVLTARGD ERSVVRGLRL GADDYLVKPV RLGELLARMD AVARRTAVTS TTEHVHVSDV EIDLPGRRVL VAGAEAKLTA KEFAILAALA SRAGTAVSRQ QLMDEVWGDA YLAVSRSLDV HLASLRVKLA RPGLITTIRG FGYRLGG
|
| |