Gene Amir_2120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_2120 
Symbol 
ID8326309 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp2345948 
End bp2346544 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content72% 
IMG OID644942670 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003099911 
Protein GI256376251 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCCAGGG TGAGTCAGGA CCACCTAGAC GCCCGCCGCC GCCAGATCCT GGACGGCTCG 
CGTGCCTGCT TCGCGCGCTT CGGCTACGAG GGCGCCACCG TGCGCCGCCT CGAAGAGGGT 
ACCGGCCTGT CCAGGGGAGC GATCTTCCAC CACTTCCGGG ACAAGGAGTC GCTGTTCCTG 
GCGCTGGCCG AGGACGACGC GATCCGCATG GCCGAGGTGG TGGCCGAGCA GGGCCTGGTC 
CAGGTGATGC GAGAACTGCT CGCAACCCCG CGCCACGATG ATGGCGAGCA GCACCCGGCG 
GACTGGCTGG GCACCCGCCT GGAGGTGTCA CGGCGACTGC GCACGGACCC TGAGTTCCGC 
GGGCGCTGGG CGGAGCGCTC CAGCCAGCTC ACCGACGCGA CCAGGCAGCG CCTCCAGCGC 
CAGCGCGAGG CGGGCAACCT CCGCGACGAC GTGGACGTGG CCGTCCTGAC GTCGTTCCTG 
GAGCTGGTCC TGGAAGGCCT GGTCTCCCAC CTGGCCATGG GCCTCCCCGC AGACGACCTG 
GAACCGGTCC TCGACCTGGT GGAGGAGTCC GTCCGCCGCC ACCGCCGCAC AGGCTGA
 
Protein sequence
MPRVSQDHLD ARRRQILDGS RACFARFGYE GATVRRLEEG TGLSRGAIFH HFRDKESLFL 
ALAEDDAIRM AEVVAEQGLV QVMRELLATP RHDDGEQHPA DWLGTRLEVS RRLRTDPEFR 
GRWAERSSQL TDATRQRLQR QREAGNLRDD VDVAVLTSFL ELVLEGLVSH LAMGLPADDL 
EPVLDLVEES VRRHRRTG