| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_2108 |
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| Symbol | |
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| ID | 8326297 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 2332890 |
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| End bp | 2333858 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644942658 |
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| Product | pyridoxal biosynthesis lyase PdxS |
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| Protein accession | YP_003099899 |
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| Protein GI | 256376239 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0214] Pyridoxine biosynthesis enzyme |
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| TIGRFAM ID | [TIGR00343] pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00868127 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGTTGCTT CCTCTTCTCC TTCCGCTGGT GGCGCTGCTG CCACCGGTGC TGTCGCCACC
GGCGTTGACG GTGCCGCCGA CTCCGCTCGG GTCACCGGAA CCGCGCGGGT CAAGCGCGGC
ATGGCGGAGA TGCTCAAGGG CGGCGTGATC ATGGACGTGG TCGACGCCGA GCAGGCCAAG
ATCGCCGAGG ACGCGGGCGC CGTCGCGGTC ATGGCGCTGG AGCGGGTGCC CGCCGACATC
CGCGCCCAGG GTGGCGTGTC GCGGATGAGC GACCCGGACA TGATCGAGGG GATCATCTCG
GCCGTGTCGA TCCCCGTCAT GGCCAAGGCG CGGATCGGGC ACTTCGTCGA GGCCCAGGTG
CTCCAGTCCC TGGGCGTCGA CTACGTCGAC GAGTCCGAGG TGCTCACGCC CGCCGACTAC
GCCAACCACA TCGACAAGTG GCAGTTCACC GTTCCTTTCG TGTGCGGTGC GACGAACCTG
GGTGAAGCGC TGCGGCGCAT CACCGAGGGG GCCGCGATGA TCCGGTCCAA GGGCGAGGCG
GGCACCGGTG ACGTCTCCAA CGCCACCACC CACATGCGCA AGATCCGGGC GGAGATCTTG
CGCTTGCAGA ACCTCCCTTC CGATGAGCTG TACGTCGCGG CCAAGGAGTT GCAGGCGCCC
TACGAGCTGG TTCGCGAGGT CGCCGAGGCG GGCAAGCTGC CCGTGGTGCT GTTCACGGCA
GGAGGCATCG CCACGCCCGC CGACGCGGCG ATGATGATGC AGCTCGGAGC CGAGGGCGTG
TTCGTCGGTT CCGGCATCTT CAAGTCGGGC AACCCCGCGC AGCGCGCCGA GGCCATCGTC
AAGGCGACCA CCTTCTACGA CGACCCCGAC ACCATCGCCA AGGTCTCCCG CGGACTGGGT
GAGGCCATGG TCGGCATCAA CGTCGACGAC CTCCCGCAGC CCCACCGGCT CGCCGAGCGC
GGTTGGTGA
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| Protein sequence | MVASSSPSAG GAAATGAVAT GVDGAADSAR VTGTARVKRG MAEMLKGGVI MDVVDAEQAK
IAEDAGAVAV MALERVPADI RAQGGVSRMS DPDMIEGIIS AVSIPVMAKA RIGHFVEAQV
LQSLGVDYVD ESEVLTPADY ANHIDKWQFT VPFVCGATNL GEALRRITEG AAMIRSKGEA
GTGDVSNATT HMRKIRAEIL RLQNLPSDEL YVAAKELQAP YELVREVAEA GKLPVVLFTA
GGIATPADAA MMMQLGAEGV FVGSGIFKSG NPAQRAEAIV KATTFYDDPD TIAKVSRGLG
EAMVGINVDD LPQPHRLAER GW
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