| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_2107 |
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| Symbol | |
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| ID | 8326296 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 2330391 |
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| End bp | 2332616 |
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| Gene Length | 2226 bp |
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| Protein Length | 741 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644942657 |
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| Product | elongation factor G |
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| Protein accession | YP_003099898 |
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| Protein GI | 256376238 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0480] Translation elongation factors (GTPases) |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00484] translation elongation factor EF-G |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000230841 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCAGCA AGAACTCCGA CAACTCACAC CCGGCAGCCG CGGTCGCTGT GGACGATCCC
GGCAAGGTGC GCAACGTCGT CCTCGTCGGT CCGTCCGGGT CGGGCAAGAC GACGCTCACC
GAGGCTCTGC TGACCGGAAC CGGTGTGCTG AGCCGGGCGG GCTCGGTCGC CGAGGGGACC
ACGGTGTGCG ACCACGATCC GGCCGCTGTG CGGCAGCAGC GGTCGGTCGG GTTGGCCGTG
GCGCCGGTGC GGCACGGTGA CATCAAGATC AATCTCATCG ACACGCCGGG GTACGCCGAC
TTCGTCGGTG AGCTGCGGGC CGGGTTGCGG GCGGCGGACG CGGCGCTGTT CGTCGTGTGC
GCGGCCGAGG GGGTCGACGC GGCGACCAGG GCGCTGTGGG CCGAGTGCGC CGCGGTGGGG
ATGCCGCGCG CGGTCGTCAT CTCGCGGACC GACCACCAGC GAGCCGACGT CGCGGCGACC
ATCACCGCCT GCCAGGAGGC GTTCGGCGCG GGAGTGGTCC CGCTCTACCT GCCGGGTGAC
GGGAGTGACG GAAATGACGG GAGTGGAGGC GGGAACGAGA GCAGGGGAAG CAGCAGAAGC
GGAGGTGGGA GCAGGAGTGG AGGTGGGAGC GGAAGCGGAG GGGGCGGTGG GCGGGGAGGT
GGGAGTGGGC TGTTCGCCGG TGGGGTCACC GAGACCGGGT TGGTGAACCT GTTGGCGCAG
GTGGAGTTCA CCGAGGAGGA GCACCGGGCG GGGCGGGAGG TGTTGATCGA GGGGATCATC
GCCGAGAGCG AGGACGAGAC GCTCTTGGAG CGGTACCTCG GGGGTGAGGT GGTCGAGCAG
GCCACGTTGG TCGCTGATCT GGAGAAGGCC GTCGCGCGTG GGGCCTTCCA CCCGGTCATC
CCGGTGTGCG CCACGACCGG GGTAGGGCTG CCCGAGCTGC TCGACGGGAT CAGCAGGGCG
TTCCCCTCGC CGCTGGAGCA CCCGCTGCCC GAGGTGACCG GGGTGGACGG GGTGCCTCGG
CCTCGGCTCG CCGTCGACCC GGACGGGCCG CTGGTGGCCG AGGTGGTGCG AACCGCTGTG
GACTCGTTCG TCGGGCGGGT GTCGTTGGTC CGGGTGTTCT CGGGGACGCT CCGGCCCGAG
CGGGCGGTGC ACGTGTCCGG GCACGGGATG GGCGGTCGGG GGCACGAGGA CCACGACGTG
GACGAGCGGG TGGCGCACGT CTACTCGCCG TTGGGCGCGA GTCTGCGCGA GGTGCCCTTC
TGCGTGGCCG GGGACCTGTG CGCGGTGACC AAGCTGGGCA GCGCCGAGAC CGGGGACACG
GTGTCCGCGC CGGACGAGCC GCTGCTCGTG CGGCCGTGGG CGATGCCCGA GCCGTTGCTG
CCGGTGGCGG TGGCGGCGCG CAGTCGCAGT GACGAGGACT CGTTGGCGCG CAACCTCGGG
AAGCTCGTCG CGGGTGATCC GACGCTGCGG TTGGAGCGGA ACACCGAGAC GCACCAGCTG
GTGCTGTGGT GCATGGGCGA GGCGCACGCG GACGTGGTGC TGGCCAGGTT GCGCGCGGGC
GGGACGGAGG TGGACACCGA GCCGGTGCGG GTGGCGCTGC GCGAGACGTT CGCCTCGGTG
GCGAAGGGGC ATGGCAGGCA CGTGAAGCAG TCCGGTGGGC ACGGGCAGTA CGCGGTGTGC
GACGTCGTGG TGGAGCCGCT GCCGCGCGGG GCAGGGTTCG AGTTCGTGGA CCGGACGGTC
GGCGGTTCGA TCCCGAACCA GTTCGTGCCC AGCGTGGAGA AGGGCGTGCG CGCGCAGCTC
GAACGCGGGC TGCCCGGAGG ACATCCGGTG GTGGACGTCC GGGTGACGCT GGTGGACGGC
AAGGCGCACT CGGTGGACTC GTCGGACGCG GCGTTCCAGA CGGCGGGGTC GCTGGCGTTG
AAGGACGCCG CCTCGGGCGG GGCGACGGTG CTGCTGGAAC CGGTGGACGA GGTGGTGGTG
CGGTTGCCGG ACGAGCACCT GGGCGCGGTG CTGGGTGATC TGTCGGCTAG GCGGGGGCGG
GTGCTGGGCA CCGAGGCGGA CGTCAGTCCG GGGATCTCGA CGATCCGGGC GGAGGTGCCG
TGCACCTCGC TGCTGCGCTA CGCGGTGGAG TTGCGCTCGC TCACCTCGGG AACGGGGGCG
CACACCCGCC GCTTCGCCCA CTACGAGCCG CTACGAGTCA CTACCGGCAG CGGTGGCCAG
CCCTAG
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| Protein sequence | MSSKNSDNSH PAAAVAVDDP GKVRNVVLVG PSGSGKTTLT EALLTGTGVL SRAGSVAEGT
TVCDHDPAAV RQQRSVGLAV APVRHGDIKI NLIDTPGYAD FVGELRAGLR AADAALFVVC
AAEGVDAATR ALWAECAAVG MPRAVVISRT DHQRADVAAT ITACQEAFGA GVVPLYLPGD
GSDGNDGSGG GNESRGSSRS GGGSRSGGGS GSGGGGGRGG GSGLFAGGVT ETGLVNLLAQ
VEFTEEEHRA GREVLIEGII AESEDETLLE RYLGGEVVEQ ATLVADLEKA VARGAFHPVI
PVCATTGVGL PELLDGISRA FPSPLEHPLP EVTGVDGVPR PRLAVDPDGP LVAEVVRTAV
DSFVGRVSLV RVFSGTLRPE RAVHVSGHGM GGRGHEDHDV DERVAHVYSP LGASLREVPF
CVAGDLCAVT KLGSAETGDT VSAPDEPLLV RPWAMPEPLL PVAVAARSRS DEDSLARNLG
KLVAGDPTLR LERNTETHQL VLWCMGEAHA DVVLARLRAG GTEVDTEPVR VALRETFASV
AKGHGRHVKQ SGGHGQYAVC DVVVEPLPRG AGFEFVDRTV GGSIPNQFVP SVEKGVRAQL
ERGLPGGHPV VDVRVTLVDG KAHSVDSSDA AFQTAGSLAL KDAASGGATV LLEPVDEVVV
RLPDEHLGAV LGDLSARRGR VLGTEADVSP GISTIRAEVP CTSLLRYAVE LRSLTSGTGA
HTRRFAHYEP LRVTTGSGGQ P
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