Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_2079 |
Symbol | |
ID | 8326268 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 2303283 |
End bp | 2304050 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644942630 |
Product | short chain dehydrogenase |
Protein accession | YP_003099871 |
Protein GI | 256376211 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTCGAAC GACTCCAGGG CCGGGTCGCG GTGATCACCG GTGGCGGCAG CGGCATCGGG CTGGCCTCGG CGCGCAGGTT GGCGTCCGAG GGCGCGAAGG TCGTCGTGGC CGACGTGGAC GGGGAATCGG GCAAGGCGGC GGCCGAGGAG GTCGGCGGGC TGTTCGTGCG GGTGGACGTG ACCGACGAGG AGCAGGTGCG GGCCCTGTTC CAGACCACCG TGGACACCTA TGGCGCGGTG GACGTGGCGT TCAACAACGC GGGCATCTCC CCGCCGGACG ACGACTCGAT CCTGACCACG GGCATCGAGG CGTGGCGGCG GGTGCAGGAG GTCAACCTGA CGTCGGTGTA CCTGTGCAGC AAGCACGCCA TCGGGCACAT GGTCGAGCGC GGCAGGGGGT CGGTGATCAA CACGGCGTCG TTCGTGGCGA CCATGGGCGC GGCGACCTCG CAGATCTCCT ACACCGCCTC GAAGGGCGGG GTGCTGGCGA TGACGCGGGA GCTGGGCGTG CAGTTCGCGC GGCAGGGCGT GCGGGTGAAC GCGCTGTCCC CTGGACCGGT CAACACCCCG CTGCTGCGGG AGCTGTTCGC GAAGGACCCG GAGCGCGCCG CGCGGCGGCT GGTCCACGTG CCGCTGGGCA GGTTCGCCGA GCCGGAGGAG ATCGCGGCGG CGGTGGCGTT CCTGGCGAGC GACGACTCGT CGTTCATGAC GGCGTCGAAC TTCCTGGTGG ACGGCGGCAT CTCCGGCGCC TACGTGACCC CGCTGTGA
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Protein sequence | MVERLQGRVA VITGGGSGIG LASARRLASE GAKVVVADVD GESGKAAAEE VGGLFVRVDV TDEEQVRALF QTTVDTYGAV DVAFNNAGIS PPDDDSILTT GIEAWRRVQE VNLTSVYLCS KHAIGHMVER GRGSVINTAS FVATMGAATS QISYTASKGG VLAMTRELGV QFARQGVRVN ALSPGPVNTP LLRELFAKDP ERAARRLVHV PLGRFAEPEE IAAAVAFLAS DDSSFMTASN FLVDGGISGA YVTPL
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