Gene Amir_2079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_2079 
Symbol 
ID8326268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp2303283 
End bp2304050 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content71% 
IMG OID644942630 
Productshort chain dehydrogenase 
Protein accessionYP_003099871 
Protein GI256376211 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCGAAC GACTCCAGGG CCGGGTCGCG GTGATCACCG GTGGCGGCAG CGGCATCGGG 
CTGGCCTCGG CGCGCAGGTT GGCGTCCGAG GGCGCGAAGG TCGTCGTGGC CGACGTGGAC
GGGGAATCGG GCAAGGCGGC GGCCGAGGAG GTCGGCGGGC TGTTCGTGCG GGTGGACGTG
ACCGACGAGG AGCAGGTGCG GGCCCTGTTC CAGACCACCG TGGACACCTA TGGCGCGGTG
GACGTGGCGT TCAACAACGC GGGCATCTCC CCGCCGGACG ACGACTCGAT CCTGACCACG
GGCATCGAGG CGTGGCGGCG GGTGCAGGAG GTCAACCTGA CGTCGGTGTA CCTGTGCAGC
AAGCACGCCA TCGGGCACAT GGTCGAGCGC GGCAGGGGGT CGGTGATCAA CACGGCGTCG
TTCGTGGCGA CCATGGGCGC GGCGACCTCG CAGATCTCCT ACACCGCCTC GAAGGGCGGG
GTGCTGGCGA TGACGCGGGA GCTGGGCGTG CAGTTCGCGC GGCAGGGCGT GCGGGTGAAC
GCGCTGTCCC CTGGACCGGT CAACACCCCG CTGCTGCGGG AGCTGTTCGC GAAGGACCCG
GAGCGCGCCG CGCGGCGGCT GGTCCACGTG CCGCTGGGCA GGTTCGCCGA GCCGGAGGAG
ATCGCGGCGG CGGTGGCGTT CCTGGCGAGC GACGACTCGT CGTTCATGAC GGCGTCGAAC
TTCCTGGTGG ACGGCGGCAT CTCCGGCGCC TACGTGACCC CGCTGTGA
 
Protein sequence
MVERLQGRVA VITGGGSGIG LASARRLASE GAKVVVADVD GESGKAAAEE VGGLFVRVDV 
TDEEQVRALF QTTVDTYGAV DVAFNNAGIS PPDDDSILTT GIEAWRRVQE VNLTSVYLCS
KHAIGHMVER GRGSVINTAS FVATMGAATS QISYTASKGG VLAMTRELGV QFARQGVRVN
ALSPGPVNTP LLRELFAKDP ERAARRLVHV PLGRFAEPEE IAAAVAFLAS DDSSFMTASN
FLVDGGISGA YVTPL