Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_2006 |
Symbol | |
ID | 8326191 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 2222764 |
End bp | 2224032 |
Gene Length | 1269 bp |
Protein Length | 422 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644942555 |
Product | isocitrate lyase |
Protein accession | YP_003099800 |
Protein GI | 256376140 |
COG category | [C] Energy production and conversion |
COG ID | [COG2224] Isocitrate lyase |
TIGRFAM ID | [TIGR01346] isocitrate lyase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.249594 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGAGCG CGGAGCAGAT CGCCGACCAG TGGGCCACCG ACGCGCGGTG GTCCGGGATC GAGCGCACGT ACGGCGCCGA GGACGTGGTC GCCCTGCGCG GCAGCGTCGT GGAGGAGCAC ACGCTGGCCC GGCGGGGCGC CGAGCGGCTG TGGGAGCTGC TGCACGACGA GGACCACGTC CACGCGCTGG GCGCGCTGAC CGGCAACCAG GCGGTGCAGC AGGTCAGGGC CGGGCTGAAG GCCATCTACC TGTCGGGCTG GCAGGTCGCG GCGGACGCGA ACCTGTCCGG GCAGACCTAC CCGGACCAGA GCCTGTACCC GGCCAACTCG GTGCCGCAGG TGGTCCGGCG GATCAACAAC GCGCTGCTGC GGGCCGATCA GGTCGAGCAC GCGGAGGGGC GCGGCGGCGA GCGCGAGTGG CTGGCGCCGA TCGTCGCGGA CGCCGAGGCC GGGTTCGGCG GGGTGCTCAA CGCGTTCGAG CTGATGCGCG CCATGATCGC GGCGGGCGCG GCCGGGGTGC ACTGGGAGGA CCAGCTCGCG TCGGAGAAGA AGTGCGGGCA CCTGGGCGGG AAGGTGCTGA TCCCGACCGG GCAGCACGTG CGCACCCTCA ACGCCGCGCG GCTGGCCGCC GACGTCTCCG GTGTGCCGAC GCTGGTGGTC GCCCGCACCG ACGCGCAGGC CGCGACGCTG CTGACCACCG ACGTCGACGA GCGGGACCGG CCGTTCACCA CCGGCGAGCG CACCGCCGAG GGGTTCTACC GGGTGCGGGG CGGGATCGAG CCGTGCGTCG CCCGGGGGCT GGCGTACGCG CCGCACGCCG ACCTGCTGTG GATGGAGACC TCGCTGCCGG ACCTGGGCGT GGCGCGGGAG TTCGCCGAGG CGGTCAAGGC CCGCTACCCG GAGAAGATGC TGGCGTACAA CTGCTCGCCG TCGTTCAACT GGCGCAAGCA CCTGGACGAC ACGACGATCG CGAAGTTCCA GCGGGAGCTG GGGCACATGG GCTACAAGTT CCAGTTCATC ACGCTGGCCG GGTTCCACGC GCTCAACCAC TCGATGTTCG ACCTGGCGCG CGGGTACGCC GAGAGCGGCA TGAGCGCGTA CGTCGAGCTG CAGGAGCGGG AGTTCGCCGC CGAGCGGGAC GGCTACACCG CCGTGAAGCA CCAGCGCGAG GTCGGGACCG GCTACTTCGA CCGGGTCAGC ACCGCGCTGA ACCCCGCCGG TGAGACCACC GCGCTGTCCG GGTCCACCGA GCAGGCCCAG TTCGCCTGA
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Protein sequence | MLSAEQIADQ WATDARWSGI ERTYGAEDVV ALRGSVVEEH TLARRGAERL WELLHDEDHV HALGALTGNQ AVQQVRAGLK AIYLSGWQVA ADANLSGQTY PDQSLYPANS VPQVVRRINN ALLRADQVEH AEGRGGEREW LAPIVADAEA GFGGVLNAFE LMRAMIAAGA AGVHWEDQLA SEKKCGHLGG KVLIPTGQHV RTLNAARLAA DVSGVPTLVV ARTDAQAATL LTTDVDERDR PFTTGERTAE GFYRVRGGIE PCVARGLAYA PHADLLWMET SLPDLGVARE FAEAVKARYP EKMLAYNCSP SFNWRKHLDD TTIAKFQREL GHMGYKFQFI TLAGFHALNH SMFDLARGYA ESGMSAYVEL QEREFAAERD GYTAVKHQRE VGTGYFDRVS TALNPAGETT ALSGSTEQAQ FA
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