Gene Amir_1938 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_1938 
Symbol 
ID8326123 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp2149854 
End bp2150945 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content79% 
IMG OID644942487 
Producthistidine kinase 
Protein accessionYP_003099732 
Protein GI256376072 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCACCGCT CCGAGCGCGC CGTCCGCCGC TGGCTGCTGA TCGGTCTCGC GCTCGTCGCC 
TGGTTCGTCC CCACCCTGGT CGTCGACCTG CTGGAGGCCG ACCTGCCCCC GGCGCAGCGC
GTGGCGGCGG TGGCGCTGGT CGTCGGCTAC GGGATCGCGC TGACCGCGCC GCTGCCGGCG
CGCCGCCGCC TCACCGAGGG GCGGCAGGCG CTGCTGGTCG GCGCGCTGGT GGCCTGGGGC
CTGCTGGTGA TCGCGGTGAC CGGCCTGGAC TCGGCCGTGC TGCTGGTCCA CGTGCTCGGC
ACCGCCTCGA TCGTGCTGCC CGCCAGGCTC GCGCTGACCA TGAACGGGAC GGCCGCCGCC
GCGCTGGTCG CGGGCCTGCT GTGGCGGGCG GCCGGGTCCG GGCAGCCGGT GCACCTGGTG
GCGGCGCTGG GCTCGCTGGT CGTGGGGTTC GCGGCCGTGG TCCGGCTGGT GCGGACCCGG
CGGGAGCTGG CGCGGGCGCG GGTGGAGATC GCCGCGCTGG CCGCCGCCGA GGAGCGGCAC
CGGCTCGGGC GGGACCTGCA CGACATCCTC GGGCACAGCC TCACCACGGT GACCGTGAAG
GCCGGGCTGG CGCGGCGGCT GCTGGAGCGC GGCGAGGTCG AGCGGGCGCT CGGCGAGGTC
GGGGAGCTGG AGACCCTGGC CAGGCAGGCG CTCGGGGACG TGCGGGCGAC GGTCGGCGGG
TACCGGGAGG TGGCGCTGGC CGGTGAGCTG GTGGCGGCCC GGTCGGCGCT GCGGGCGGCC
GGGATCGAGG CGGACCTGCC GAGCGCGGTG GACAACGTCG CGCCGGAGCT GCAGGGGGTG
TTCGGGTACG TGCTGCGGGA GGCGGTGACG AACGTGCTGC GGCACTCGGC GGCCCGCACC
TGCTCGGTGC GCCTGGGCGC GCGGTGGATC GAGGTCGTGG ACGACGGGCG CGGCGCGGGC
GCCGGGCAAC CGGGGAGCGG GGTGGCGGGG TTGCGGGAGC GGCTGGCCGA GATCGGCGGG
GCGCTGGAGG CGGGACCGGT CGCGGGCGGG TACCGGCTGC GCGCGGAGGT CCGGGACGGG
GGGACGGCGT GA
 
Protein sequence
MHRSERAVRR WLLIGLALVA WFVPTLVVDL LEADLPPAQR VAAVALVVGY GIALTAPLPA 
RRRLTEGRQA LLVGALVAWG LLVIAVTGLD SAVLLVHVLG TASIVLPARL ALTMNGTAAA
ALVAGLLWRA AGSGQPVHLV AALGSLVVGF AAVVRLVRTR RELARARVEI AALAAAEERH
RLGRDLHDIL GHSLTTVTVK AGLARRLLER GEVERALGEV GELETLARQA LGDVRATVGG
YREVALAGEL VAARSALRAA GIEADLPSAV DNVAPELQGV FGYVLREAVT NVLRHSAART
CSVRLGARWI EVVDDGRGAG AGQPGSGVAG LRERLAEIGG ALEAGPVAGG YRLRAEVRDG
GTA