Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_1930 |
Symbol | |
ID | 8326115 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 2143103 |
End bp | 2144605 |
Gene Length | 1503 bp |
Protein Length | 500 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644942479 |
Product | Alpha-N-arabinofuranosidase |
Protein accession | YP_003099724 |
Protein GI | 256376064 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3534] Alpha-L-arabinofuranosidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00284341 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCTGAGAG CAGTTGTGTC GTTCCGGACC GACGACGTGG TGGGGCCGGT GCGCAGGAGG CTGTTCGGGT CGTTCGTGGA GCACCTGGGG AGGTGCGTGT ACGGCGGGAT CCACGAGCCG GGGCACCCGT CGGCGGACGA GGAGGGGTTC CGGCGGGACG TGCTGGCGCT GACCCGCGAG ATGGGGGTGT CGGTGGTCCG GTACCCCGGT GGGAACTTCG TGTCCGGGTA CCGCTGGGAG GACGGGGTGG GGCCGCGCGG GCAGCGGCCG GTGCGGCGGG ACCTGGCGTG GCGCAGCATC GAGTCGAACG AGGTCGGGCT GGACGAGTTC GTGCGGTGGG CCCGGAAGGC GGAGGTCGAG GTGATGTACG CGGTCAACCT CGGGACTCGG GGGGTGGCCG AGGCGCTGGA CGTGCACGAG TACGCGAATC ACGGTTCGGG AACGACGTTG TCGGACCTGC GGGTCGCGAA CGGGAGCGCG GAGCCGCACG GGATCTCGTT GTGGTGCTTG GGGAACGAGA TGGACGGGCC GTGGCAGCTG GGGCACAAGA CGGCGGAGGA GTACGGCAGG CTGGCGGCTG AGACCGCCAG GGCGCTGCGG CAGGCGGAGC CGGGGGTGGA GTTGGTGGCG TGCGGGAGCT CCAGCTCCGC GATGCCCACC TTCGGCGAGT GGGAGCGGGT TGTGCTGGAG GCCGCGTACG AGGAGGTCGA CCACATCTCG TGCCACGCGT ACTACGAGGT GCTGGACGGG GACGTGGACA GTTTTCTGGC TTCTGCGGAG GACATGGACC GGTTCATCGG GAGTGTTGCT GCCACGGCGG ACGCGGTGGG CGCGAAGGTG AAGAGCCCGA AGCGGATCGG GATCTCGTTC GACGAGTGGA ACGTGTGGTC GATCAAGGAC TTTGAGGCGT CGCGGACCTC GGAGTGGCGG AGTGCGCCGA AGTTGATCGA GGACACGTAC GACGTGGCGG ACGCGGTGGT GGTGGGGAAC TTGTTGATCT CGCTGCTGCG GCACGCGGAT CGGGTCGCGG TGGCTTGCCA GGCGCAACTG GTGAACGTGA TCGCGCCGAT TCGGTGCGAG CCGGATTCGG CGGCTTGGAG GCAGACGACG TTTCACCCGT TCGCGTTGAC GTCGCGGTTG GCGCGGGGGG AGGTGCTGCG GACTGTGGTG GATGGGCCTA CGCAGGACAC CGGGCGGTTC GGGGAGGTTC CGGTGGTGGA CGCGGTGGTG ACGCGGGAGG GGGAGGAGGT TGTGGTGTTC TTGGTCAACC GGCATCGGCA CGAGTCGGTT GAGGTTGGGT TCGAGGGTGG GGAGCGGGGG GTTGTCGAGG CTTGGGTGTT GGGGGATGAG GACAGTGGGG CGATCAACAC TGCTTTGCAA CCGGAGAGGG TGAAGCCGAG GGGGTTGGGG GTTGAGCGGG ATGGGACGGC GGTGCGGGTT GTCCTGCCGC CGGTTTCGTG GGGGGTGGTT CGGATGGGGG GAGATGTGAG GGGAGAGATG TGA
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Protein sequence | MLRAVVSFRT DDVVGPVRRR LFGSFVEHLG RCVYGGIHEP GHPSADEEGF RRDVLALTRE MGVSVVRYPG GNFVSGYRWE DGVGPRGQRP VRRDLAWRSI ESNEVGLDEF VRWARKAEVE VMYAVNLGTR GVAEALDVHE YANHGSGTTL SDLRVANGSA EPHGISLWCL GNEMDGPWQL GHKTAEEYGR LAAETARALR QAEPGVELVA CGSSSSAMPT FGEWERVVLE AAYEEVDHIS CHAYYEVLDG DVDSFLASAE DMDRFIGSVA ATADAVGAKV KSPKRIGISF DEWNVWSIKD FEASRTSEWR SAPKLIEDTY DVADAVVVGN LLISLLRHAD RVAVACQAQL VNVIAPIRCE PDSAAWRQTT FHPFALTSRL ARGEVLRTVV DGPTQDTGRF GEVPVVDAVV TREGEEVVVF LVNRHRHESV EVGFEGGERG VVEAWVLGDE DSGAINTALQ PERVKPRGLG VERDGTAVRV VLPPVSWGVV RMGGDVRGEM
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