| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_1793 |
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| Symbol | |
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| ID | 8325978 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 1971079 |
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| End bp | 1973784 |
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| Gene Length | 2706 bp |
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| Protein Length | 901 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 644942342 |
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| Product | transcriptional regulator, XRE family |
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| Protein accession | YP_003099587 |
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| Protein GI | 256375927 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2319] FOG: WD40 repeat |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.03808 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCGCGTG GAGAGCGTCC GCTGGACGTC GGTGACACCC CGCTGCTCAA GTTCGCCGCC
GACCTGCGCT CGCTGCGCGA CCGCGCGGGC GGGCACAGCT ACCGGCAGCT CGGGGCCAAG
GCGCACTACT CCGCCACCAC CCTCTCCGAC GCCGCGGGCG GTCGGAGGCT GCCGAGCCTC
GCCGTCACGC TCGCCTACGT GCGGGCCTGC GAGGGGGACG TCGCCGCCTG GGAGGACCGG
TGGCACGAGG TCGCCGCCGC CGTCGCGCCC GAGGCGCCGC CGCCGGTCGA GCAGCAGCCG
CCGTACGCCG GGCTCGCCGC GTTCCAACCG CGCGACTCCG AGTGGTTCTT CGGCCGCGAC
CAGCTCCTCG AAGACCTCCT CGCCAGGGTC GGCTCCGCCC GGTTCACCGC CGTGTTCGGG
GCCTCCGGCG CGGGCAAGTC CTCGCTGCTG CAAGCCGGTC TGGTCGCGCG CTTCGCCGGG
ACCACGCTCC TCACCACCCC GTCCGCCACC GACCTCGCCC TCCCCGAGAC CCCCGCCGAC
CTGGTGATCG TCGACCAGTT CGAGGAGGTC TTCACGCTCT GCTCGGACAC CTCCCGCCGC
GCCGCGTTCA TCGCCGCGCT GCTCGACGCC CCGCAGCACG TGGTGATCAG CGTCCGCGCC
GACTTCTACG GCCACTGCGC CCAGCACCCC GACCTGGTCG CCGCGCTGGA GGACAACCAG
CTCCTGATCG GGCCCATGGG CACCGAGGAG CTCCGCCAGG CGATCATGCA ACCGGCCGTG
AAGGCCTCCT GCACCGTCGA GACCGCCCTG GTCTCCCGCC TCGTCGCCGA CGCGACCGGC
CAGCCCGGCG TGCTCCCGCT GCTCTCGCAC GCCCTCCTGG AGACCTGGCG CCGCCGCAGG
GGCGCGACGC TCACCCTCGC CGGGTACGAG GCGGCGGGCG GCGTGCAGTA CGCCATCGCG
CAGACCGCCG AGCGCACCTA CACCTCCCTC GAACGCCAGC AGCGCGAGCT GGCCCGCCAG
GTGTTCCTGC GCCTGACCGC GCTCGGCGAC GGCACCGAGG ACACCAAGCG CAGCCTGCCG
CGCGCCGAGC TGGACGACGA CGTGGACGTC GACGTGGTCC TCGACCGGCT CGCCCACGCC
CGCCTGCTCA CCCTCGACCG CGACCGCGTG GAGATCGCCC ACGAGGCGCT GATCCGCTCC
TGGCCCCGCC TGCGCGGCTG GCTCGCCGAG GACCGCGAGG GCCTGCGCAC CCTGCGCCAG
CTCACCGAGG CCGCCGCGAC GTGGATCTCC CTGCACCGCG CCCCCGACGC CCTCTACCGG
GGCACCCGCC TGGACACCGC GCTGGAGTGG ACCCGCCGCC CCCGCGCCCG CACGTCGGCG
CGCGAGCGCG AGTTCCTGGC CGCCAGCTCC CAGGCCCGCG ACCGCGAGCG CCGCCTCGCC
CACCGGCAGA CCCGCAGGCT CCGCCAGCTC GTGGCGCTGC TGGCGGTGCT GCTGCTGCTC
GCGGGCGGCG CGATGGTGCA GACGATCCGG GCGCAGGAGA CCGCGACCGA GCAGCGCAAC
ATCGCGCTGG CCCGGTTCGC CGCCAACGAG TCGCTGGGCA AGCGCGAGAG CGACCCGCTG
GTCGCCGACC AGCTGGTGAT CGCCGCCTAC CGGCTCAGCG GCACCGACGA CCTGCGCGAC
GCGGTGCTCG GCGCGCACGC GGGCAAGTCC GGCAGCACGA TCAGCCGGTC CGTGCGCACC
TCCCCCGCGC TGTCCCCGGA CGGCCGCCCG CTGCCCAGCG CCCGCGTCGG CGAACCGGTC
GACGACCGCC TCTACCCGCG CATCGGCACG CTCACCACCC CGGTCGACGC GGTCACCTCG
TTCGCCCTGA CCCCGGCCGC GCAAGCGTTC GCGACCACGC TGGAGAGCCC CGGCGCCCGG
CTGTGGGACG CCACCGACGC CCGCGAACCG GTCCCCGCGC ACACCTTCAG CGGGCAGGTC
ACCCAGCTGT CCTACGCGCC CAACGGCAAG CTGCTGGCGC TGGTGCGGGA GGCGATGACC
GTCGAGCTGT GGGACGCCGC CGACCCCGCC GCGCCCCGCC TGATCGGCGT GCTGCCCGAC
CACCCGCGCT GGGTCACCGC GCTCGCGTTC AGCCAGGACA GCCGGGTGCT GGCGACCACC
GACAACCAGA GCCGGGTGCG GCTGTGGGAC GTCGGCGACC CCGCCGCGCC GAGGCAGACC
GCGCAGCTGT CCGACGGGGA GGACGTGTCC GTGGTCGCGC TCGCCCCCGA CCACCGCACC
GTCGCGCTGG GCGGGGTGAG CGGCGTGGTG CGGCTGTGGG ACGTGTCGGC GGCGGAGGGG
CCGCGCCGGA TCGCCGAGCT GGACGGGCAC CGGCAGCCGG TGCGGGCGCT CGGGTTCCGG
CACGACGGCA CGGCGCTGGC CACGGTCGGC CGGGACGACA CGGTGCGGCT GTGGGACCTG
GCCGACGCCG CCAGGCCGCG CGCCGCCGGG CGGATCAGCG GCAGCAGCGA GGGCGTGTAC
GGGGTGTCGT TCGGGGAGAC CTGGGGCGAG GTGGTGACCG CGCGCGCGGA CGGGACGTTC
CGGCACTGGG AGTTCGACCT GGACCACGTG GTGGCGCAGC TGTGCGCGTC GGTGCGCGAG
CCGATCAGCC GCGAGGAGTG GTCACGGTAC TTCGGTTCGC TGGAGCACCG GCCGCCGTGC
GGGTGA
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| Protein sequence | MPRGERPLDV GDTPLLKFAA DLRSLRDRAG GHSYRQLGAK AHYSATTLSD AAGGRRLPSL
AVTLAYVRAC EGDVAAWEDR WHEVAAAVAP EAPPPVEQQP PYAGLAAFQP RDSEWFFGRD
QLLEDLLARV GSARFTAVFG ASGAGKSSLL QAGLVARFAG TTLLTTPSAT DLALPETPAD
LVIVDQFEEV FTLCSDTSRR AAFIAALLDA PQHVVISVRA DFYGHCAQHP DLVAALEDNQ
LLIGPMGTEE LRQAIMQPAV KASCTVETAL VSRLVADATG QPGVLPLLSH ALLETWRRRR
GATLTLAGYE AAGGVQYAIA QTAERTYTSL ERQQRELARQ VFLRLTALGD GTEDTKRSLP
RAELDDDVDV DVVLDRLAHA RLLTLDRDRV EIAHEALIRS WPRLRGWLAE DREGLRTLRQ
LTEAAATWIS LHRAPDALYR GTRLDTALEW TRRPRARTSA REREFLAASS QARDRERRLA
HRQTRRLRQL VALLAVLLLL AGGAMVQTIR AQETATEQRN IALARFAANE SLGKRESDPL
VADQLVIAAY RLSGTDDLRD AVLGAHAGKS GSTISRSVRT SPALSPDGRP LPSARVGEPV
DDRLYPRIGT LTTPVDAVTS FALTPAAQAF ATTLESPGAR LWDATDAREP VPAHTFSGQV
TQLSYAPNGK LLALVREAMT VELWDAADPA APRLIGVLPD HPRWVTALAF SQDSRVLATT
DNQSRVRLWD VGDPAAPRQT AQLSDGEDVS VVALAPDHRT VALGGVSGVV RLWDVSAAEG
PRRIAELDGH RQPVRALGFR HDGTALATVG RDDTVRLWDL ADAARPRAAG RISGSSEGVY
GVSFGETWGE VVTARADGTF RHWEFDLDHV VAQLCASVRE PISREEWSRY FGSLEHRPPC
G
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