| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_1762 |
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| Symbol | |
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| ID | 8325947 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 1934811 |
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| End bp | 1937168 |
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| Gene Length | 2358 bp |
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| Protein Length | 785 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644942311 |
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| Product | RNA binding S1 domain protein |
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| Protein accession | YP_003099556 |
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| Protein GI | 256375896 |
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| COG category | [K] Transcription |
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| COG ID | [COG2183] Transcriptional accessory protein |
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| TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.432806 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACGACAG CCATTCACCA GAGGATCGCC GAAGAGCTCG GCGTGCGCGC GAACCAGGTG
TCCGCCGCCG TCGACCTCCT CGACGGCGGT TCGACCGTTC CGTTCATCGC CCGCTACCGC
AAGGAGGCGA CCGGGGCGCT GGACGACGCG CAGCTGCGCT CTCTGGAGGA GCGGCTGGGC
TACCTCCGCG AGCTGGAGGA CCGCCGCGCC GCCGTCCTGG AGTCCATCCG CTCCCAGGGC
AAGCTCGACG ACGCCCTCGA AGCCCAGATC CTCGCCGCCG ACTCGAAGGC CCGGCTCGAG
GACCTCTACC TGCCGTACAA GCCCAAGCGC CGCACCAAGG CCCAGATCGC CCGCGAGCAG
GGCCTCGAAC CGCTCGCCGA CGCGCTGCTG AACGACCCGA CGCTGAGCCC GCAGGACACC
GCCGCCGGCT ACCTGACCGA GGAGGTCGCC GACGCCGCCG CCGCGCTGCA GGGGGCGCGC
GCCATCCTGG TCGAGCGCTT CGGCGAGGAC GGCGACCTGA TCGGCGAGCT GCGCGAGCGC
ATGTGGGGCC TCGGCCAGGT CGGCTCGAAG GTCCGCGAGG GCAAGGAGGA GGACGGCGCC
AAGTTCGCCG ACTACTTCGA GTTCTCCGAG CCGTTCGCGA AGCTGCCGTC GCACCGCATC
CTGGCGCTGC TGCGCGGTGA GAAGGAGGAG GTCCTCGACC TCCAGTTCGA GCCGGGCGAC
ACCCCCGAGG AGGGCCCGAG CGGCTACGAG GTCGCCATCG CCGCCCGCTT CGGCGTCGAC
GACCGGGGCC GCCCCGCCGA CCGCTGGCTC ACCGACACGG TCCGCTGGGC CTGGCGCACC
CGCATCCTCG TGCACCTGGG CATCGACCTG CGCTCCCGGC TGCGCCAGTT CGCCGAGGAC
GAGGCCGTGC GCGTGTTCGC CTCCAACCTG CGCGACCTGC TGCTCGCCGC CCCGGCGGGC
ACCCGCGCCA CCATGGGCCT CGACCCCGGT TTCCGCACCG GCGTGAAGGT CGCCGTGGTC
GACGCGACCG GCAAGGTCGT CGCCACCGAC GTGATCTACC CGCACGTGCC CGCGAACCGC
TGGGACGAGT CGATCGCCAA GCTGGCGGCC CTGTCCAAGA AGCACGACGT CGAGCTGATC
GCCATCGGCA ACGGCACCGC CTCGCGCGAG ACCGACAAGC TCGCGGGCGA CCTGCTCAAG
AAGCACGCGG ACCTCAAGCT CACCAAGGTC GTCGTGTCCG AGGCGGGCGC GTCGGTGTAC
TCCGCGTCCG CGTTCGCCTC GGCCGAGCTG CCCGGCATGG ACGTGTCGCT GCGCGGCGCG
GTGTCCATCG CCCGCAGGCT CCAGGACCCG CTCGCCGAGC TGGTCAAGAT CGACCCGAAG
TCCATCGGCG TCGGCCAGTA CCAGCACGAC CTGTCCGAGT CGAAGCTGTC CCGCTCGCTC
GACGCGGTGG TCGAGGACTG CGTGAACGCG GTCGGCGTCG ACCTGAACAC CGCGTCCGCG
CCGCTGCTGA CCCGCGTCTC CGGCATCACC GCCGGTCTCG CGGAGAACAT CGTGCAGCAC
CGCGACAGCA ACGGTCCTTT CCGGACTCGC AAGGCGCTCA AGGACGTGGC GCGCCTGGGC
CCCAAGGCTT TCGAGCAGTG CGCGGGCTTC CTGCGCATCC GCGACGGCGA GGACCCGCTC
GACGCGTCCT CGGTGCACCC CGAGGCCTAC CCGGTGGTGC GGCGCATCCA GGAGAGCGCG
GGGGCCGACC GGCTCATCGG CAACACCGCG GTGCTGAAGT CGTTGCGGCC CCAGGACTTC
GTGGACGACA AGTTCGGCCT GCCGACCGTC ACGGACATCC TGCGCGAGCT GGAGAAGCCC
GGCCGCGACC CGCGCCCGGC GTTCAAGACC GCGACGTTCG CCGACGGGGT CGAGAAGATC
GCCGACCTCA AGCCCGGCAT GGTGCTGGAG GGCGTGGTGA CGAACGTGGC CGCGTTCGGC
GCGTTCGTCG ACGTCGGCGT GCACCAGGAC GGCCTCGTGC ACATCTCGGC GCTGTCGGAC
ACCTACGTCA AGGACCCGCG CGACGTGGTC AAGTCCGGCG ACGTGGTGCG GGTGAAGGTG
CTGGAGGTCG ACATCCCGCG CAAGCGCATC GGCCTGACCC TGCGCCTCAC CGACGAGCCC
GGCCGCAAGC CCAAGGACCA GCAGGGCGAG CGGCGCGGTG GCGGTGGTGG CGGCCAGCGT
GGTGGCGGCG ACCGGCGCGG TGGCGGCAAC GGCGGCAGCG GCGGCAGCGG CGGCAACCGG
GGGCGCCAGC AGCAGGAGCG CCCGCCCGCC AACAACGCGA TGGCGGAGGC CCTGCGCAGG
GCCGGCCTGG GCAAGTGA
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| Protein sequence | MTTAIHQRIA EELGVRANQV SAAVDLLDGG STVPFIARYR KEATGALDDA QLRSLEERLG
YLRELEDRRA AVLESIRSQG KLDDALEAQI LAADSKARLE DLYLPYKPKR RTKAQIAREQ
GLEPLADALL NDPTLSPQDT AAGYLTEEVA DAAAALQGAR AILVERFGED GDLIGELRER
MWGLGQVGSK VREGKEEDGA KFADYFEFSE PFAKLPSHRI LALLRGEKEE VLDLQFEPGD
TPEEGPSGYE VAIAARFGVD DRGRPADRWL TDTVRWAWRT RILVHLGIDL RSRLRQFAED
EAVRVFASNL RDLLLAAPAG TRATMGLDPG FRTGVKVAVV DATGKVVATD VIYPHVPANR
WDESIAKLAA LSKKHDVELI AIGNGTASRE TDKLAGDLLK KHADLKLTKV VVSEAGASVY
SASAFASAEL PGMDVSLRGA VSIARRLQDP LAELVKIDPK SIGVGQYQHD LSESKLSRSL
DAVVEDCVNA VGVDLNTASA PLLTRVSGIT AGLAENIVQH RDSNGPFRTR KALKDVARLG
PKAFEQCAGF LRIRDGEDPL DASSVHPEAY PVVRRIQESA GADRLIGNTA VLKSLRPQDF
VDDKFGLPTV TDILRELEKP GRDPRPAFKT ATFADGVEKI ADLKPGMVLE GVVTNVAAFG
AFVDVGVHQD GLVHISALSD TYVKDPRDVV KSGDVVRVKV LEVDIPRKRI GLTLRLTDEP
GRKPKDQQGE RRGGGGGGQR GGGDRRGGGN GGSGGSGGNR GRQQQERPPA NNAMAEALRR
AGLGK
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