Gene Amir_1726 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_1726 
Symbol 
ID8325911 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp1889771 
End bp1890394 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content74% 
IMG OID644942275 
Productcopper resistance protein CopC 
Protein accessionYP_003099520 
Protein GI256375860 
COG category[R] General function prediction only 
COG ID[COG2372] Uncharacterized protein, homolog of Cu resistance protein CopC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.889834 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCCGTC TGGTGATCCC GGCGCTCCTG GCCTGCCTGG TCGTGCTGGG CGTAGCGGTT 
CCCGCGCTTG CGTCCGCGCA CGCCGAGCTG GTCTCCAGCG ACCCGGCCTC GGGCGCCGTG 
CTGACCGCCG CGCCCGACCG GATCACGCTC GTGTTCAGCG AACCCGTGTC CGCCGAGAGC 
GCGGAGGTGG GCGTCACCGG CCAGGACGGC AAGGCGTGGC AGCCGCGTTC CGTGCGGGTC 
AACGGCAACT CGCTCGTGGT CCAGCTCGAC CCGGCCACCG CCCGCACCGG CGTCACCACC 
GCGTCCTGGC GCGTGCGCTC CGAGGACGGC CACGACGCCA CCGGGAAGGT CGCCTTCCGC 
CTGGACCTCG GCGACGACGG CCAGACCGGC GCGGGCGAGC CCAACAGCCC CGGCGAGCAG 
CAGTCCGCCG CCCCGACCCT GTTCTCGACC GGCGAGAGCC CGACCATCGG CAGCACGGTC 
GACAACCGGG CGGGCAACGA GAACGAGGAC ATGCCCGCCT GGCTGTGGAT CGGGGTGGGG 
GCGGTGATCG TGCTCGGGTT CGCGCTGGTC GCGGTGCTGC GAGGCCGCGA CGACAACCAG 
GCGAAACCCC GCAAGCGCGG GTGA
 
Protein sequence
MPRLVIPALL ACLVVLGVAV PALASAHAEL VSSDPASGAV LTAAPDRITL VFSEPVSAES 
AEVGVTGQDG KAWQPRSVRV NGNSLVVQLD PATARTGVTT ASWRVRSEDG HDATGKVAFR 
LDLGDDGQTG AGEPNSPGEQ QSAAPTLFST GESPTIGSTV DNRAGNENED MPAWLWIGVG 
AVIVLGFALV AVLRGRDDNQ AKPRKRG