Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_1613 |
Symbol | |
ID | 8325797 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 1775651 |
End bp | 1776133 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644942162 |
Product | TrkA-C domain protein |
Protein accession | YP_003099408 |
Protein GI | 256375748 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0490] Putative regulatory, ligand-binding protein related to C-terminal domains of K+ channels |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.634302 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAACGTCG AAGTAACCCC CCTTCCGGGG ATCGGCACCC GTCAGGACTT CATGATCCGC GCCGGGCGTC GGATGGGGGT GATCACGTAC CGCGACGGCC GCTTCGAGCT GATCATCTCG AAGGAGGAGG ACGCGGACGC GTGCTCCGCC TCCATAGCGC TCACGCCCGC CGAGGCGGGC ACGCTCGCCA GCCTGCTCGG CGCGCCCGGC CTGGTCGCGC ACCTGGAGCA CCAGCACAAG GACGTGGCGG GCATCACCAC GCGCCAGTTC CCGATCGTGC CGGGCTCCCG GTACGACGGC GAGACGCTGG CCGCCACCGA GCTGCGCACC CGCACGGGCG CGTCGGTCGT GGCCGTGGTC CGCTCCGGCA ACGCGCACCC CTCGCCCCGC CCCGACTTCG TGTTCGAGGG CGGTGACCTG GTGGTCGTCG TCGGCACCTC CGAGGGCCTC GCCTCGACAG CCGACGTCCT GGGCGGTGGC TGA
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Protein sequence | MNVEVTPLPG IGTRQDFMIR AGRRMGVITY RDGRFELIIS KEEDADACSA SIALTPAEAG TLASLLGAPG LVAHLEHQHK DVAGITTRQF PIVPGSRYDG ETLAATELRT RTGASVVAVV RSGNAHPSPR PDFVFEGGDL VVVVGTSEGL ASTADVLGGG
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