Gene Amir_1613 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_1613 
Symbol 
ID8325797 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp1775651 
End bp1776133 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content72% 
IMG OID644942162 
ProductTrkA-C domain protein 
Protein accessionYP_003099408 
Protein GI256375748 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0490] Putative regulatory, ligand-binding protein related to C-terminal domains of K+ channels 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.634302 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAACGTCG AAGTAACCCC CCTTCCGGGG ATCGGCACCC GTCAGGACTT CATGATCCGC 
GCCGGGCGTC GGATGGGGGT GATCACGTAC CGCGACGGCC GCTTCGAGCT GATCATCTCG
AAGGAGGAGG ACGCGGACGC GTGCTCCGCC TCCATAGCGC TCACGCCCGC CGAGGCGGGC
ACGCTCGCCA GCCTGCTCGG CGCGCCCGGC CTGGTCGCGC ACCTGGAGCA CCAGCACAAG
GACGTGGCGG GCATCACCAC GCGCCAGTTC CCGATCGTGC CGGGCTCCCG GTACGACGGC
GAGACGCTGG CCGCCACCGA GCTGCGCACC CGCACGGGCG CGTCGGTCGT GGCCGTGGTC
CGCTCCGGCA ACGCGCACCC CTCGCCCCGC CCCGACTTCG TGTTCGAGGG CGGTGACCTG
GTGGTCGTCG TCGGCACCTC CGAGGGCCTC GCCTCGACAG CCGACGTCCT GGGCGGTGGC
TGA
 
Protein sequence
MNVEVTPLPG IGTRQDFMIR AGRRMGVITY RDGRFELIIS KEEDADACSA SIALTPAEAG 
TLASLLGAPG LVAHLEHQHK DVAGITTRQF PIVPGSRYDG ETLAATELRT RTGASVVAVV
RSGNAHPSPR PDFVFEGGDL VVVVGTSEGL ASTADVLGGG