| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_1597 |
|---|
| Symbol | |
|---|
| ID | 8325781 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 1761088 |
|---|
| End bp | 1761873 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644942146 |
|---|
| Product | SpoOM family protein |
|---|
| Protein accession | YP_003099392 |
|---|
| Protein GI | 256375732 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4326] Sporulation control protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGTGTTCA AGAGGATGTT GCGCGCGTTC GGGGTCGGGG GACCCTCGGT GGACACCGTG
CTGAGCAACC CCAACGTCCG CCCCGGCGAC GTGCTGACCG GCGAGGTCCG CATCTCCGGC
GGCGACCACC AGGCCGAGAT CGACCGGGTG AAGCTCACCC TGGTCACCAG GGTCGAGGTG
GAGCGCGGCG ACGAGGAGCA CGTCCGCAAC GTCGAGTTCG CGGGCGTCGT CGTCGCCGAG
AAGGTCGTGG TCGGCGCCGG TCAGCAGTAC TCGCTGCCGT TCCAGTTCCA GATCCCGCTG
GAGACGCCGC TGACCGTGGT GCATGGCAGG CACCTGCACG GCATGACGAT GGGCCTGCGC
ACCGAGCTGG ACGTGCGCGG CGCGATCGAC CCCGGCGACC TGGACCCGTT CGCGGTGCAC
CCGCTGCCGT CGCAGGAGCA CGTGCTGGCC GCGTTCGACG CGCTCGGCTT CACCTTCAGC
AAGGCCGACT GCGAGCAGGG CCGCATCCAC GGCGTGCCGC AGCAGCTGCC GTTCTACCAG
GAGATCGAGT TCCGGCCCCC GGTGCAGTTC CTCAACCGGA TCAGCCAGGT CGAGCTGAGC
TTCGTCGCCG ACCCGCAGCA GCTGCACGTG GTGCTGGAGG CCGACCGCAG GGGCGGGCTG
CTGCGCGCGG GCGGCGACGT CTTCGGGCAC TTCTCGCTGC CGCACTCGCA GGTCCCCGGC
ACCGACTGGG CCGGGCTCGT GCACCAGTGG ATGGACCAGG TCGCCCGCAG GCGCGGCATC
TTCTAG
|
|---|
| Protein sequence | MVFKRMLRAF GVGGPSVDTV LSNPNVRPGD VLTGEVRISG GDHQAEIDRV KLTLVTRVEV
ERGDEEHVRN VEFAGVVVAE KVVVGAGQQY SLPFQFQIPL ETPLTVVHGR HLHGMTMGLR
TELDVRGAID PGDLDPFAVH PLPSQEHVLA AFDALGFTFS KADCEQGRIH GVPQQLPFYQ
EIEFRPPVQF LNRISQVELS FVADPQQLHV VLEADRRGGL LRAGGDVFGH FSLPHSQVPG
TDWAGLVHQW MDQVARRRGI F
|
|---|
| |