| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_1578 |
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| Symbol | |
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| ID | 8325762 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 1739653 |
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| End bp | 1740558 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 644942127 |
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| Product | protein of unknown function DUF6 transmembrane |
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| Protein accession | YP_003099373 |
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| Protein GI | 256375713 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5006] Predicted permease, DMT superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGGTCACCG CGCACGTCGA CAGCACCCCC GCACCCCGCT CGCCCCTGGC CGCCGCCTCC
GCCGCGGTGG CGAAGGGGGT GTCCGCCGTC CCGCCCACCG CGCTGCTCCT GCTGGGGGTG
ATCAGCGTGC AGGTGGGCGC TGCGGTCGCC AAGCACCTGT TCGCCCAGGT CGGGGCGTCC
GGGGCGGTCA CGCTGCGGCT CGTGCTGGCC GCGCTGGTGC TGGTGGTGGT GTGGCGGCCG
TCGCTGCGGA TGCCGGCGCG GACGTGGGTG GTGGTCGGCG GGTTCGGCGT GGTCCTCGGG
GCGATGAACC TGCTCATCTA CCAGGCGATC GAGCGCATCC CGCTGGGCGC GGCGGTCACC
ATCGAGTTCC TCGGGCCGCT GTCGGTGGCG GTGCTCGGGT CCCGGCGGTG GGTGGACGGG
CTGTGGGCGG TGCTCGCCGG GGTCGGGGTG CTGCTGCTGG CCAGGGCGGA CGGCGGGCTG
TCGTTCGCCG GGGTGGCGTT CGCGCTGGGG GCGGCGGCGT GCTGGGCCGC CTACATCCTG
CTGTCGGCCG CCGTGGGCGG ACGCACCAGC GGGGGCGGCG GGCTGGCGCT GGCGATGGTC
GTCGGGTCGC TGGTGGTCCT GCCGTTCGGG ATCGGGGAGG CCGGGGCCGA GCTGGTGGAC
CCGACGGTGC TGCTGATCGG GCTGGGGGTG GCGCTGCTGT CCTCGGTGGT GCCGTACTCG
CTGGAGCTGG AGGCGCTGCG GCGGATCCCG TCGCGGACCT TCGGGGTGCT GATGAGCCTG
GGACCGGCCG CGGCGGCGCT GGCCGGGCTG GTGCTGCTGG GGGAGCGGTT GAACTGGGTG
CAGTGGGGCG CGGTGGCCTG CGTGGTGGCG GCCTCGATCG GGGCGACCCG CAGCGCCCGG
CGGTGA
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| Protein sequence | MVTAHVDSTP APRSPLAAAS AAVAKGVSAV PPTALLLLGV ISVQVGAAVA KHLFAQVGAS
GAVTLRLVLA ALVLVVVWRP SLRMPARTWV VVGGFGVVLG AMNLLIYQAI ERIPLGAAVT
IEFLGPLSVA VLGSRRWVDG LWAVLAGVGV LLLARADGGL SFAGVAFALG AAACWAAYIL
LSAAVGGRTS GGGGLALAMV VGSLVVLPFG IGEAGAELVD PTVLLIGLGV ALLSSVVPYS
LELEALRRIP SRTFGVLMSL GPAAAALAGL VLLGERLNWV QWGAVACVVA ASIGATRSAR
R
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