Gene Amir_1568 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_1568 
Symbol 
ID8325752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp1729531 
End bp1730190 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content77% 
IMG OID644942117 
Producttranscriptional regulator, GntR family 
Protein accessionYP_003099363 
Protein GI256375703 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACACCGC CGATCCCGCT GGGGCTGACC GGGCAGACCG TGGACGCCCT GCGCGAGATC 
GTCCTGTCGG GCGAGGTGTC CGCAGGTCAG CGGGTCAACG AGGTCGAGCT GGCGGCGAGG 
CTGGGCATCA GCCGGGGGCC GGTGCGCGAG GCGATCCGGC AGCTGGCGTC CGAGGGGCTG 
CTGGTGCTCG TCCCCAACCG GGGCGCGTAC GTGCCCGTCG CCGACGCCAC CGAGGTCACC 
CTGCTGTTCG AGCTGCGCAC GGCGCTGGAG TGCGCCGCCG CCGGGCTCGC CGCGGCCCGG 
CGCTCCGAGG CGGACGTGAC CGCGATGCGC GCCGTGTGCG CCGAGTCCCG GCGCAGCCAC 
CGGGCGGGCG AGCGGTTCCC GCACCGGCTG GACCTGGCCT TCCACAACGC CCTGCTCGAC 
GCCGCCGCCA GCCCCCGGAT CGCCGAGCAG GTGCGGCTGG TCCAGCAGCG GGTGGTGCTG 
CTGCGCAGCG CGCTGCGCGA CGACCCGCCG CACCAGACCG CGTCGCTGGA CGACCACGAG 
GCGCTGGTCG ACGCGGTCGA GGCCGGCGAC GGCGCGCGGG CCGCCGAGGT CATGCGGGCG 
CACCTGGAGC GGGTGCGGGT GCAGCTGGTC GCCGAGGTCG GGGCCGGGCC CCGGAGCTGA
 
Protein sequence
MTPPIPLGLT GQTVDALREI VLSGEVSAGQ RVNEVELAAR LGISRGPVRE AIRQLASEGL 
LVLVPNRGAY VPVADATEVT LLFELRTALE CAAAGLAAAR RSEADVTAMR AVCAESRRSH 
RAGERFPHRL DLAFHNALLD AAASPRIAEQ VRLVQQRVVL LRSALRDDPP HQTASLDDHE 
ALVDAVEAGD GARAAEVMRA HLERVRVQLV AEVGAGPRS