Gene Amir_1522 details

Gene Information

• Locus tag: Amir_1522
• ID: 8325702
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Actinosynnema mirum DSM 43827
• Kingdom: Bacteria
• Replicon accession: NC_013093
• Strand: +
• Start bp: 1678144
• End bp: 1680168
• Gene Length: 2025 bp
• Protein Length: 674 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 644942069
• Product: hypothetical protein
• Protein accession: YP_003099319
• Protein GI: 256375659
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0531] Amino acid transporters

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.579036
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGTCCAAGC TCGCAACCGC GGCCAAGCGC CTGCTGGTCG GCAGGCCCTT CCGCAGCGAC 
CGGCTCGCCC ACACCCTCCT GCCCAAGCGG ATCGCGCTGC CGGTGTTCGC CTCGGACGCC 
ATGTCCTCCG TCGCGTACGC GCCGGAGGAG ATCTTCCTGG TGCTGTCGGT GGCGGGCCTG 
TCGGCCTACG CGATGGCCCC GTGGGTGGGC GTGGTCGTGG TGCTGGTGAT GCTCGTCGTG 
GTCGCCAGCT ACCGGCAGAA CGTGCACGCC TACCCCTCCG GCGGCGGCGA CTACGAGGTC 
GCCACGGTCA ACCTGGGCCG CAGGGCGGGC CTCACGGTCG CCAGCGCGCT GCTGGTGGAC 
TACATCCTCA CCGTCGCGGT CTCCATCTCC TCGGCGGCGG CCAACATCGG TTCGGCCATC 
CCCTTCGTGG CCACGCACAA GGTCGAGTTC GCGGTCGTCG CGATCGTCCT GCTCACCGCC 
GTGAACCTGC GCGGCATCCG CGAGTCCGGC GGCGCCTTCG CCATCCCGAC CTACGCCTTC 
ATGGGCGGCG TGCTCCTGAT GATCGGCTAC GGCCTGGTGC GCGCGCTCGT CCTGGGCGAC 
GAGATGCGCG CCGAGTCCGC CGACCTGGTC ATCCGGGCCG AGCACGACGA CCTCGCGGGC 
TTCGCGTTCG TGTTCCTGGT CCTGCGCGCC TTCTCCTCCG GCTGCGCGGC CCTCACCGGC 
GTCGAGGCCA TCAGCAACGG CGTGCCCGCG TTCCGCAAGC CCAAGTCCCG CAACGCCGCC 
ACCACGCTGC TGATGATGGG CGGCGTCGCG GTCGTGATGC TGATGGGCCT GATCGCCCTC 
GCCCAGCTCA CCGGCGTGCG GATGGCCGAG CACCCGAAGG AGCAGATCGT CGGGGCCCCC 
GAGGGCTACG AGCAGAAGAC CATGATCGCC CAGATCGCGG GCGCGGTCTT CGACGGCTTC 
CCCGCCGGCT TCTTCTTCAT CGCCGTCGTC ACCGCCCTGA TCCTGGTCCT GGCCGCGAAC 
ACCGCGTTCA ACGGCTTCCC CGTGCTCGGC TCGATCCTCG CCCAGGACCG CTACCTGCCG 
CGCCAGCTGC ACACCCGCGG CGACCGGCTC GCGTTCAGCA ACGGCATCGT GTTCCTCGCG 
GGCGCGGCGA TCGTGCTCGT GGTCGCGTTC GACGCCGAGG TCACCAAGCT CATCCAGCTC 
TACATCGTCG GCGTGTTCGT CTCGTTCACG ATGAGCCAGC TCGGCATGAT CCGGCACTGG 
ACCCGGCTGC TGGCCGACGA GGACGCCCCC GAGCGCCGCG CCCGGATGCG CCGCTCCAGG 
GTCATCAACG CGATCGGCCT GGCGATGACC GCGTCCGTGC TGGTCGTGGT GCTGCTGACC 
AAGTTCACCA AGGGCGCCTG GATCGCGATC GCCGCCATGG CCGCCATCTA CGCCCTGATG 
ACCGCCATCC GCGGGCACTA CGACCGGGTC GCCGAGGAGC TGCGCCAGGA GGAGCGGCAG 
AAGCTGCTGC CCTCCCGCAA CCACGCGATC GTGCTGGTGT CCACCCTGCA CATGCCGACC 
CTGCGGGCGC TGGCCTACGC CAAGGCGACC CGGCCGGACG TGCTGGAGGC GGTCACCGTC 
AACGTGGACG ACGGCGACAC CCGCAAGCTG GTGCGGGCGT GGGAGAAGGA GGGCTTCAAG 
GTCCCGCTGA AGGTGGTCGA GTCGCCCTAC CGCGAGATCA CCAAGCCGGT CCTGGACTAC 
GTCAAGCGCA TCCGCACCGC GAACCCGCGC GACGTGGTCA CCGTCTTCAT CCCCGAGTAC 
GTGGTCGGCC GCTGGTGGGA GTCCATCCTG CACAACCAGA GCGCGCTGCG GCTCAAGGGC 
AGGCTGCTCT TCGAGCCCGG CGTGATGGTC ACCAGCGTGC CTTGGCAGCT CGCGTCCTCC 
CACAGGGTGA CGCACCGGGA CGACGCGCTG GCTCCCGGCC AGGTCCGCAG GGGCCTCGAC 
CAGCGCGACC TCGAACAGCG AACGAAGAAC CGGAGTGGCG AGTGA 

 

Protein sequence

MSKLATAAKR LLVGRPFRSD RLAHTLLPKR IALPVFASDA MSSVAYAPEE IFLVLSVAGL 
SAYAMAPWVG VVVVLVMLVV VASYRQNVHA YPSGGGDYEV ATVNLGRRAG LTVASALLVD 
YILTVAVSIS SAAANIGSAI PFVATHKVEF AVVAIVLLTA VNLRGIRESG GAFAIPTYAF 
MGGVLLMIGY GLVRALVLGD EMRAESADLV IRAEHDDLAG FAFVFLVLRA FSSGCAALTG 
VEAISNGVPA FRKPKSRNAA TTLLMMGGVA VVMLMGLIAL AQLTGVRMAE HPKEQIVGAP 
EGYEQKTMIA QIAGAVFDGF PAGFFFIAVV TALILVLAAN TAFNGFPVLG SILAQDRYLP 
RQLHTRGDRL AFSNGIVFLA GAAIVLVVAF DAEVTKLIQL YIVGVFVSFT MSQLGMIRHW 
TRLLADEDAP ERRARMRRSR VINAIGLAMT ASVLVVVLLT KFTKGAWIAI AAMAAIYALM 
TAIRGHYDRV AEELRQEERQ KLLPSRNHAI VLVSTLHMPT LRALAYAKAT RPDVLEAVTV 
NVDDGDTRKL VRAWEKEGFK VPLKVVESPY REITKPVLDY VKRIRTANPR DVVTVFIPEY 
VVGRWWESIL HNQSALRLKG RLLFEPGVMV TSVPWQLASS HRVTHRDDAL APGQVRRGLD 
QRDLEQRTKN RSGE