| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_1445 |
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| Symbol | |
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| ID | 8325625 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 1596358 |
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| End bp | 1597281 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 644941992 |
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| Product | TRAP transporter solute receptor, TAXI family |
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| Protein accession | YP_003099242 |
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| Protein GI | 256375582 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2358] TRAP-type uncharacterized transport system, periplasmic component |
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| TIGRFAM ID | [TIGR02122] TRAP transporter solute receptor, TAXI family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGCGCCG CCCTCGCGGC GCTGCTCGCG CTGGCCTCCG TGGCGCTCTC CGGCTGCTCG
GGGGAGTTCT CCTCGGTCCG CCTCACCATC GCCAGCGGCT CGACCGGCGG CGTCTACTCC
AAGCTCAGCA CCGCGCTCGC GGGCGCCTGG AGCCGGGACC CCGGCGTCCC CGCCCCCGAG
GTGGCCGCCA CGGCGGGCTC GCTGGACAAC CTGGAGCGCC TGCGCAGCGG TCGCGCCCAG
ATCGGGTTCA GCGCCGCCGA CGCCGCCCAG TCCGCCGCGC CCGGCGCGCA CCGGCTGTAC
GCGCTGGCCC GGATGCACGA CGACTACCTG CAGGTCGTGG TCCGCGACGA CCTGCCCGCC
ACCAAGGTCG CCGACCTGCG CGGCCTGCGC GTCTCGCTCG GCGCGGTCGA CTCCGGCGTG
AAGCTGATCT CCGAGCGGCT GCTGTCCGCG GCGGGCATCT CGCCCTCGTC CGACCTGGAC
GCCCAGTACC TGTCGCTGGA CTCGTCGGTC AGCGCGATGC GGGCGGGCGA GCTGGACGCG
TTCTTCTGGT CCGGCGGCGT GCCGACCGAC CTGGTCACCG ACCTGTCCGC CAGCGTCGCG
CTGCGGATGC TGGACCTGGG CGACGTGCTG CCCGGCCTGC GCGAGCGGTG GCCGGTCTAC
TTCTCGGCGA CCCTGCCCGC CTCGGCCTAC GAGCTGCCCG GCGGCCCGGT CACCACCCTG
GTGGTGCGCA ACTTCCTTCT GGTCAACGAC CAGGTCACCG ACGAGGTGGC CACCGCGCTC
CTGCGCGGCA TGTTCGCCGC GCAGGACGCG CTGGTCGCGG CGAGCCCGGT GGCCCGCTCC
ATAGAGGCCC GCTCGGCGAT CGAGACCACG CCGATCCCGC TGCACCCCGG CGCCGTCGCC
TACTACCGGG ACGTCAAGGT CTGA
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| Protein sequence | MRAALAALLA LASVALSGCS GEFSSVRLTI ASGSTGGVYS KLSTALAGAW SRDPGVPAPE
VAATAGSLDN LERLRSGRAQ IGFSAADAAQ SAAPGAHRLY ALARMHDDYL QVVVRDDLPA
TKVADLRGLR VSLGAVDSGV KLISERLLSA AGISPSSDLD AQYLSLDSSV SAMRAGELDA
FFWSGGVPTD LVTDLSASVA LRMLDLGDVL PGLRERWPVY FSATLPASAY ELPGGPVTTL
VVRNFLLVND QVTDEVATAL LRGMFAAQDA LVAASPVARS IEARSAIETT PIPLHPGAVA
YYRDVKV
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