| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_1398 |
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| Symbol | |
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| ID | 8325578 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 1543167 |
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| End bp | 1544627 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644941946 |
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| Product | hypothetical protein |
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| Protein accession | YP_003099196 |
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| Protein GI | 256375536 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03459] carotene biosynthesis associated membrane protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGCTCCT CGGCGACCCC CGGAACCGAG CCTCGGGGCA TCCCCGTCCG GACGATCCTG
CTGGGCGTCG CGGGGGTCAT GCTCGTCGCG CTCGGCGGCA GCGGCGCGGG CGCCGTGGTC
AAGCGCGACC CCCTGCTGGC CGCGACCTCG CTGAGCTGGA TCCGCTACGG CCACGGCCAG
GACCTGGCCA CCGCCGTGCT CTACCTCGGG CTCGCGCTCG TGGTGTGGTC GTGGGTCCGG
CTGGGCCGGA TGGTGCTGCG CGGGCACGTG GGCAGCCGCG CGGTGCTCGC CGCGGTGGGC
GCCTGGACGC TGCCGCTGCT GTTCGCGCCG CCGCTGTTCA GCAAGGACAT CTACAGCTAC
CTGGCGCAGG GCCAGCTCGC GCTCAACGGG CTCGACCCGT ACCAGGTGGG CCCCGCGGTG
CTCCAGAGCC CGCTGTCGGA CAACGTGAGC TGGGTCTGGC AGAACACGCC CGCCCCGTAC
GGCCCGCTGT TCGTGCTGCT GTCCGAGGGC GTGGTGTGGC TGACCGGCGG CAGCGTGATC
GGCGGCGTGG TGCTGCTGCG GCTGGTGCTG GTCGTGGGGC TGGCGCTGGT CTGCTGGTCG
CTGCCCGGCC TCGCCCGGCA CCTGGGCGGC AAGCCCGCCG TGGCGCTGTG GTTCGCGGCG
GCCAACCCGC TGGTGCTGGT GCACCTGATC GGCGGCGCGC ACAACGACAT GCTGATGGTC
GGCCTGATGG CCGCGGGCGT GCTGCTGGTG CTCGACGGCA GGCACGTGGC CGGGATCGTG
CTGGTGACGC TGGGCGTGGC GGTCAAGGCC ACGGCGGCGG TCGCGCTGCC GTTCCTGGTG
CTGGTCTGGG CGGCCCGCAC GGAGGGCCCC CGGCGGTCCG CGGTCGGCCG GGCCATCGGG
CGCGGCGTGG CGGTGTTCGC CGTGGTGTTC GCCGCGACGA GCGTGGTCGC GGGCCGGGAC
CTGGGCTGGC TGCCCGCGCT GAGCACGTCC TCGATGATCG TGAACTGGCT GTCGCTGCCC
AGCGCGGTCG GCGACTTCGC GCACACCCTG GTGACGCTCT TCGTGCACCT GGACCAGGGC
GTGTTCCTGA CCGTGGCGCG CGGCATCGGC TCGGCGCTGC TGGTGTTCAT CGCCTGGCGG
CAGTGGCGGG CGGCCGAGGA CGGCGGCCCG AACGCGGTGT TCCGCGCGGC CGTGACCATG
CTGGCGGTGG CGCTGCTCTC CCCGGCCACG CTGCCCTGGT ACTTCACCTG GCCGCTGGTG
CTGGGCGCGG GCCTGGCCTG GACGGTCAGC GGTCTGACCA CGGTGGCGTT CTTCTCCACC
TGGCTGCTGC TGGTGACCTT CCCGAACGGC GACACCGCGC TCTACTCGTG GGGCTACCTG
CTGGTCGCGG TGCTGCTGTC GGCGCTCGCG GCGGTCTCCC TGACCAAGGA CGACCCGCTC
CGGCTCTCGG GCAAGCCCTA G
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| Protein sequence | MRSSATPGTE PRGIPVRTIL LGVAGVMLVA LGGSGAGAVV KRDPLLAATS LSWIRYGHGQ
DLATAVLYLG LALVVWSWVR LGRMVLRGHV GSRAVLAAVG AWTLPLLFAP PLFSKDIYSY
LAQGQLALNG LDPYQVGPAV LQSPLSDNVS WVWQNTPAPY GPLFVLLSEG VVWLTGGSVI
GGVVLLRLVL VVGLALVCWS LPGLARHLGG KPAVALWFAA ANPLVLVHLI GGAHNDMLMV
GLMAAGVLLV LDGRHVAGIV LVTLGVAVKA TAAVALPFLV LVWAARTEGP RRSAVGRAIG
RGVAVFAVVF AATSVVAGRD LGWLPALSTS SMIVNWLSLP SAVGDFAHTL VTLFVHLDQG
VFLTVARGIG SALLVFIAWR QWRAAEDGGP NAVFRAAVTM LAVALLSPAT LPWYFTWPLV
LGAGLAWTVS GLTTVAFFST WLLLVTFPNG DTALYSWGYL LVAVLLSALA AVSLTKDDPL
RLSGKP
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