Gene Amir_1301 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_1301 
Symbol 
ID8325480 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp1435129 
End bp1437042 
Gene Length1914 bp 
Protein Length637 aa 
Translation table11 
GC content76% 
IMG OID644941848 
Productglycosyl transferase family 2 
Protein accessionYP_003099099 
Protein GI256375439 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1215] Glycosyltransferases, probably involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGCGGG GGGTGAAGGC GCACTGGGTC TCGCTGGGGG TGCTGCTGGC GCTGCTGATG 
GGGGTGCTGA GCTTCCACGC GCACGCCATC TCGCTGCCAG GGCACCGGGA CGCGCCGATC
CGGGTGACCG ACCCGCCGGT GCCCGAGCGC ACGCTCGCGC TCGTGGTGCA CGGCGGTCCG
CACCCGCGCT GGACTCCGAG GTTGCTGGAC GCGCTGGCCC GCACCGGAGC CAAGGCGACG
TTCCACCTGG TCGGGGCGCG GGTCAACGAG AACCCGGACC TGGTGCGGCG GATGGTCGCC
GAGGGGCACG AGGTCGGGGT CGAGTCGTTC CGGCCGGGTG AGCTGCGCCT GCTGGACGCC
GCGTTCGCGC AGAGCGCGCT GATCGCGGCG GCGGGCGTGC GCAGCGAGCT GGCCGAGCGG
GACGCCTGGT CGCCGGACCT GGAGGTGCAG GACGTCAAGG CGATCGCGGA GGCGGGCGCG
CCCGCGAACG GGGCGGGCGC GGTGCTGCGG CTGCACGACA CCAGCAGCAC GCCCGGCGCG
GTCGAGGAGC TGCGCCGGTT GTTGCCGGAC CACCGGTTCA CCACCCGCAC CGAGGCGGTC
GGGGGACCGC CGCCGCACGC GCCCGCCGAC CGGGTGGAGC TGGCCACCGC GCACGCGCTG
GCCTGGTCGC AGCGCAACGG CGACCTGCTG GTGCTGCTGC TGGACGTGGT CATCGGCGCG
GTCGCGGCGC TGGCGGTGCT GCGGGTGCTC GTGCAGCTCG GCCTCGCGCA CACCGCGCGC
AGGCTGCACC GCGAGCTGCC CGACGCGCCG CCCGGCCCGC TGCCGCCGGT GTCGGTGGTG
GTGCCCGCCT ACAACGAGGC CGTCACCATC ACCGCCGCCG TCCGCTCGCT GGTGGCCTCG
GACTACCCGG CCCCGGTCGA GGTGGTCGTG GTGGACGACG GCTCCGCGGA CGGCACCGCC
GACGTGGTGC GCGCGCTGGA CCTGCCCGGC GTCCGGGTGG TCACCAGGGA GAACGGCGGC
AAGGCGGAGG CGCTCAACAC CGGGGTGGCG CTGGCCGGGC ACGACGCGCT CGTCCTGGTC
GACGGCGACA CGATCTTCGA GCCGGGCACG CTGGCCGCGC TCGTCGCCCC GCTGGGCGCG
CCCGGCGTCG GCGCGGTGTC CGGCAACGTC AAGGTCGCCA ACCGGCGCGG GCTGCTCGGC
CGCTGGCAGC ACCTGGAGTA CACCTCGGGC TCGAACCTGG ACCGGCAGAT CCTGAACGCC
TGGCGGTGCC TGCCCACGAT CCCCGGCGCG GTCGGCGCGT TCCGCCGCGA GGCGCTGGTG
GAGGTCGGCG GGGTCAGCTC GGACACGCTC GCCGAGGACA CCGACGTGAC CATGGCGATC
ACCCGCGCGG GCTGGCGGGT GGTGTACGAG CCGGGCGCGC GGGCGTGGAC CGAGGTCCCG
GCGGGGCTGC GGTCGCTGTA CCGGCAGCGC TACCGGTGGT CCTACGGCAC GTTCCAGGCC
ATGTGGAAGC ACCGGGTCGC GGTGCGCGAG CAGGGCCGCA TGGGGCGGTT GGGGCTGCTG
TACCTGCTGC TGTTCCACCT GCTGCTGCCG CTGCTGGCGC CGGTGATGGA CGTGTACGTG
CTGTACGGCG CGCTCGTGGC GGACGCGCCC GCCGCGCTGC CGATCTGGCT GGCGTTCCTC
GCGCTGCAGA CCGCGAGCGC CGGGTACGCG CTGCGGCTGG ACGGCGAGTC GCTGCGCCCG
CTGTGGGCGT TCCCGCTGCA GCAGCTCGCC TACCGGCAGC TGACCTACCT GGTGGTGGTG
CAGTCGCTGG TGACCGCCGC GCACGGCGTC CCGCTGCGCT GGCAGTCGAT CCAGCGCACC
GGGCGCGCCG ACGCGGTGAG CCGGGAGGTC CTGGTGGGCG TGGAGGCGGC GTGA
 
Protein sequence
MKRGVKAHWV SLGVLLALLM GVLSFHAHAI SLPGHRDAPI RVTDPPVPER TLALVVHGGP 
HPRWTPRLLD ALARTGAKAT FHLVGARVNE NPDLVRRMVA EGHEVGVESF RPGELRLLDA
AFAQSALIAA AGVRSELAER DAWSPDLEVQ DVKAIAEAGA PANGAGAVLR LHDTSSTPGA
VEELRRLLPD HRFTTRTEAV GGPPPHAPAD RVELATAHAL AWSQRNGDLL VLLLDVVIGA
VAALAVLRVL VQLGLAHTAR RLHRELPDAP PGPLPPVSVV VPAYNEAVTI TAAVRSLVAS
DYPAPVEVVV VDDGSADGTA DVVRALDLPG VRVVTRENGG KAEALNTGVA LAGHDALVLV
DGDTIFEPGT LAALVAPLGA PGVGAVSGNV KVANRRGLLG RWQHLEYTSG SNLDRQILNA
WRCLPTIPGA VGAFRREALV EVGGVSSDTL AEDTDVTMAI TRAGWRVVYE PGARAWTEVP
AGLRSLYRQR YRWSYGTFQA MWKHRVAVRE QGRMGRLGLL YLLLFHLLLP LLAPVMDVYV
LYGALVADAP AALPIWLAFL ALQTASAGYA LRLDGESLRP LWAFPLQQLA YRQLTYLVVV
QSLVTAAHGV PLRWQSIQRT GRADAVSREV LVGVEAA